Acinetobacter sp. neg1 seq_16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter sp. neg1 seq_16 is characterized by a single replicon, which is indicative of its genetic organization. The sequence data for this strain is available under the accession number JSZD00000000.1. Acinetobacter species, including this strain, are known for their adaptability and resilience in various environments, often thriving in hospital settings and contributing to nosocomial infections. The presence of a single replicon suggests a streamlined genomic structure, which may be advantageous for the organism's survival and reproduction in competitive environments. Acinetobacter species are often studied for their antibiotic resistance mechanisms, highlighting the need for ongoing research in understanding their genetic adaptations. The ecological role of Acinetobacter sp. neg1 seq_16 may involve interactions with other microbial communities, particularly in environments where they can exploit available resources. Their ability to persist in diverse habitats, including soil and water, underscores their role in nutrient cycling and potential implications for bioremediation efforts. In conclusion, the traits of Acinetobacter sp. neg1 seq_16, particularly its single replicon and genetic accessibility, provide insights into its adaptability and ecological significance. Understanding such characteristics may inform strategies for managing Acinetobacter-related infections and leveraging their capabilities in environmental applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter sp. neg1
Strainseq_16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter sp. neg1 seq_16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter sp. neg1 seq_16, whole genome shotgun sequence.

Gene Summary

Adenine Count

1144824 bp

Thymine Count

1159046 bp

Guanine Count

823445 bp

Cytosine Count

790288 bp

Genome Length

3917814 bp

Protein-coding Genes

3494 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine permeasePJ15_1301Not AvailableNegative916249 - 91762247787.9
5-hydroxyisourate hydrolase (hiuase)PJ15_1302Not AvailableNegative917672 - 91800712691.0
uricasePJ15_1303Not AvailableNegative918007 - 91850718909.4
quinate/shikimate dehydrogenasePJ15_1304Not AvailableNegative918692 - 92111588204.0
porin b precursorPJ15_1305Not AvailableNegative921132 - 92246049128.7
3-dehydroshikimate dehydratasePJ15_1306Not AvailableNegative922479 - 92393952143.4
3-dehydroquinate dehydratase iPJ15_1307Not AvailableNegative923960 - 92479930693.0
protocatechuate 3,4-dioxygenase alpha chainPJ15_1308Not AvailableNegative925088 - 92571723365.3
protocatechuate 3,4-dioxygenase beta chainPJ15_1309Not AvailableNegative925730 - 92645527697.8
4-carboxymuconolactone decarboxylasePJ15_1310Not AvailableNegative926466 - 92687915544.5

Displaying genes 871 – 880 of 3591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.