Acinetobacter sp. neg1 seq_16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter sp. neg1 seq_16 is characterized by a single replicon, which is indicative of its genetic organization. The sequence data for this strain is available under the accession number JSZD00000000.1. Acinetobacter species, including this strain, are known for their adaptability and resilience in various environments, often thriving in hospital settings and contributing to nosocomial infections. The presence of a single replicon suggests a streamlined genomic structure, which may be advantageous for the organism's survival and reproduction in competitive environments. Acinetobacter species are often studied for their antibiotic resistance mechanisms, highlighting the need for ongoing research in understanding their genetic adaptations. The ecological role of Acinetobacter sp. neg1 seq_16 may involve interactions with other microbial communities, particularly in environments where they can exploit available resources. Their ability to persist in diverse habitats, including soil and water, underscores their role in nutrient cycling and potential implications for bioremediation efforts. In conclusion, the traits of Acinetobacter sp. neg1 seq_16, particularly its single replicon and genetic accessibility, provide insights into its adaptability and ecological significance. Understanding such characteristics may inform strategies for managing Acinetobacter-related infections and leveraging their capabilities in environmental applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter sp. neg1
Strainseq_16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter sp. neg1 seq_16
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter sp. neg1 seq_16, whole genome shotgun sequence.

Gene Summary

Adenine Count

1144824 bp

Thymine Count

1159046 bp

Guanine Count

823445 bp

Cytosine Count

790288 bp

Genome Length

3917814 bp

Protein-coding Genes

3494 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
inner membrane component of tripartite multidrug resistance systemPJ15_1840Not AvailablePositive3137218 - 313874454845.3
gamma-glutamyltranspeptidasePJ15_1841Not AvailablePositive3139053 - 314104770175.8
Tmrna,resume consensus sequence (at 89): aatagtcgcaaacgacgaNot AvailableNot AvailablePositive3141206 - 3141565Not Available
integral membrane proteinPJ15_1842Not AvailableNegative3141712 - 314258732566.9
d-galactarate dehydratasePJ15_1843Not AvailableNegative3142713 - 314426055661.9
d-glucarate permeasePJ15_1844Not AvailableNegative3144332 - 314569650003.1
glucarate dehydratasePJ15_1845Not AvailablePositive3145976 - 314731049131.4
5-dehydro-4-deoxyglucarate dehydratasePJ15_1846Not AvailablePositive3147573 - 314848432728.2
ketoglutarate semialdehyde dehydrogenasePJ15_1847Not AvailablePositive3148515 - 315010155585.3
putative d-glucarate or d-galactorate regulator, gntr familyPJ15_1848Not AvailablePositive3150343 - 315105627180.6

Displaying genes 2881 – 2890 of 3591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.