Pseudomonas fuscovaginae strain IRRI 6609

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fuscovaginae strain IRRI 6609 is an aerobic bacterium primarily found in agricultural soils, as well as in milk and refrigerated raw milk. This organism exhibits a single replicon, indicating a streamlined genetic structure that is characteristic of many bacteria within the Pseudomonas genus. The strain is documented under the accession number JSYZ00000000.1. The ecological significance of Pseudomonas fuscovaginae strain IRRI 6609 lies in its potential role in soil health and agricultural practices. As a member of the Pseudomonas genus, this strain may contribute to nutrient cycling within agricultural soils, enhancing soil fertility and supporting plant growth. The presence of this bacterium in milk suggests a possible interaction with dairy production, although specific effects or implications for milk quality have not been detailed in the available data. Understanding the habitat preferences and oxygen requirements of Pseudomonas fuscovaginae strain IRRI 6609 can inform agricultural microbiology and food safety practices. Its aerobic nature indicates a reliance on oxygen for growth, which may influence its survival and activity in various environments, particularly in soil, where oxygen availability can fluctuate. Overall, Pseudomonas fuscovaginae strain IRRI 6609 exemplifies the diverse roles that bacteria can play in both ecological systems and agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas asplenii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fuscovaginae strain IRRI 6609
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatagricultural soils; milk; refrigerated raw milk; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fuscovaginae strain IRRI 6609

Gene Summary

Adenine Count

1321105 bp

Thymine Count

1297012 bp

Guanine Count

2232943 bp

Cytosine Count

2283477 bp

Genome Length

7140777 bp

Protein-coding Genes

6082 genes

Non-Coding Genes

367 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, luxr familyPF66_05408Not AvailablePositive6043537 - 604436730847.4
putative small protein (duf2158)PF66_05409Not AvailablePositive6044440 - 60446678379.96
carboxynorspermidine decarboxylasePF66_05410Not AvailablePositive6045050 - 604614740702.6
carboxynorspermidine dehydrogenasePF66_05411Not AvailablePositive6046168 - 604742145775.5
4-oxalocrotonate tautomerase family enzymePF66_05412Not AvailablePositive6047653 - 60478688060.56
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase likePF66_05413Not AvailablePositive6047921 - 604863124534.4
pas domain s-boxPF66_05414Not AvailableNegative6048660 - 605021356244.7
lysozyme m1 (1,4-beta-n-acetylmuramidase)PF66_05415Not AvailableNegative6050299 - 605093723918.0
putative dienelactone hydrolasePF66_05416Not AvailablePositive6051247 - 605228737239.5
phage-related minor tail proteinPF66_05417Not AvailableNegative6052882 - 605414944753.7

Displaying genes 5581 – 5590 of 6449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.