Pseudomonas fuscovaginae strain IRRI 6609

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fuscovaginae strain IRRI 6609 is an aerobic bacterium primarily found in agricultural soils, as well as in milk and refrigerated raw milk. This organism exhibits a single replicon, indicating a streamlined genetic structure that is characteristic of many bacteria within the Pseudomonas genus. The strain is documented under the accession number JSYZ00000000.1. The ecological significance of Pseudomonas fuscovaginae strain IRRI 6609 lies in its potential role in soil health and agricultural practices. As a member of the Pseudomonas genus, this strain may contribute to nutrient cycling within agricultural soils, enhancing soil fertility and supporting plant growth. The presence of this bacterium in milk suggests a possible interaction with dairy production, although specific effects or implications for milk quality have not been detailed in the available data. Understanding the habitat preferences and oxygen requirements of Pseudomonas fuscovaginae strain IRRI 6609 can inform agricultural microbiology and food safety practices. Its aerobic nature indicates a reliance on oxygen for growth, which may influence its survival and activity in various environments, particularly in soil, where oxygen availability can fluctuate. Overall, Pseudomonas fuscovaginae strain IRRI 6609 exemplifies the diverse roles that bacteria can play in both ecological systems and agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas asplenii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fuscovaginae strain IRRI 6609
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatagricultural soils; milk; refrigerated raw milk; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fuscovaginae strain IRRI 6609

Gene Summary

Adenine Count

1321105 bp

Thymine Count

1297012 bp

Guanine Count

2232943 bp

Cytosine Count

2283477 bp

Genome Length

7140777 bp

Protein-coding Genes

6082 genes

Non-Coding Genes

367 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoprotein releasing system, transmembrane protein, lolc/e familyPF66_04604Not AvailableNegative5136417 - 513770346812.6
pilz domain-containing proteinPF66_04605Not AvailablePositive5137763 - 513835021928.2
glycerophosphoryl diester phosphodiesterasePF66_04606Not AvailablePositive5138415 - 513913726744.3
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase componentPF66_04607Not AvailableNegative5139180 - 514057450978.8
membrane-associated lipoprotein involved in thiamine biosynthesisPF66_04608Not AvailableNegative5140741 - 514166133332.4
arabinose efflux permease family proteinPF66_04609Not AvailablePositive5142075 - 514336145861.8
glyceraldehyde-3-phosphate dehydrogenase, type iPF66_04610Not AvailableNegative5143541 - 514500453098.5
transcription-repair coupling factorPF66_04611Not AvailablePositive5145356 - 5148805128460.0
protein of unknown function (duf2803)PF66_04612Not AvailablePositive5148818 - 514938420593.3
dna/rna helicase, superfamily ii, snf2 familyPF66_04613Not AvailablePositive5149416 - 5152094100907.0

Displaying genes 4791 – 4800 of 6449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.