Pseudomonas fuscovaginae strain IRRI 6609

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fuscovaginae strain IRRI 6609 is an aerobic bacterium primarily found in agricultural soils, as well as in milk and refrigerated raw milk. This organism exhibits a single replicon, indicating a streamlined genetic structure that is characteristic of many bacteria within the Pseudomonas genus. The strain is documented under the accession number JSYZ00000000.1. The ecological significance of Pseudomonas fuscovaginae strain IRRI 6609 lies in its potential role in soil health and agricultural practices. As a member of the Pseudomonas genus, this strain may contribute to nutrient cycling within agricultural soils, enhancing soil fertility and supporting plant growth. The presence of this bacterium in milk suggests a possible interaction with dairy production, although specific effects or implications for milk quality have not been detailed in the available data. Understanding the habitat preferences and oxygen requirements of Pseudomonas fuscovaginae strain IRRI 6609 can inform agricultural microbiology and food safety practices. Its aerobic nature indicates a reliance on oxygen for growth, which may influence its survival and activity in various environments, particularly in soil, where oxygen availability can fluctuate. Overall, Pseudomonas fuscovaginae strain IRRI 6609 exemplifies the diverse roles that bacteria can play in both ecological systems and agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas asplenii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fuscovaginae strain IRRI 6609
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatagricultural soils; milk; refrigerated raw milk; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fuscovaginae strain IRRI 6609

Gene Summary

Adenine Count

1321105 bp

Thymine Count

1297012 bp

Guanine Count

2232943 bp

Cytosine Count

2283477 bp

Genome Length

7140777 bp

Protein-coding Genes

6082 genes

Non-Coding Genes

367 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hrpe/yscl/flih and v-type atpase subunit ePF66_02864Not AvailableNegative3169539 - 317024626585.9
bacterial type iii secretion apparatus protein (orga mxik)PF66_02865Not AvailableNegative3170227 - 317078120953.7
type iii secretion apparatus lipoprotein, yscj/hrcj familyPF66_02866Not AvailableNegative3170778 - 317148825749.2
hypothetical proteinPF66_02867Not AvailableNegative3171485 - 317179310775.0
type iii secretion system major needle protein, yscf/mxih/prgi familyPF66_02868Not AvailableNegative3171847 - 31721049419.99
type iii secretion system protein prgh/eprhPF66_02869Not AvailableNegative3172108 - 317326242581.4
soluble lytic murein transglycosylase-like proteinPF66_02870Not AvailableNegative3173375 - 317380916359.5
dna-binding protein with winged-hth domainPF66_02871Not AvailableNegative3173806 - 317519450546.9
acyl carrier proteinPF66_02872Not AvailableNegative3175403 - 317569911210.6
invasion plasmid antigen ipadPF66_02873Not AvailableNegative3175787 - 317676436382.4

Displaying genes 3071 – 3080 of 6449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.