Pseudomonas fuscovaginae strain IRRI 6609

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fuscovaginae strain IRRI 6609 is an aerobic bacterium primarily found in agricultural soils, as well as in milk and refrigerated raw milk. This organism exhibits a single replicon, indicating a streamlined genetic structure that is characteristic of many bacteria within the Pseudomonas genus. The strain is documented under the accession number JSYZ00000000.1. The ecological significance of Pseudomonas fuscovaginae strain IRRI 6609 lies in its potential role in soil health and agricultural practices. As a member of the Pseudomonas genus, this strain may contribute to nutrient cycling within agricultural soils, enhancing soil fertility and supporting plant growth. The presence of this bacterium in milk suggests a possible interaction with dairy production, although specific effects or implications for milk quality have not been detailed in the available data. Understanding the habitat preferences and oxygen requirements of Pseudomonas fuscovaginae strain IRRI 6609 can inform agricultural microbiology and food safety practices. Its aerobic nature indicates a reliance on oxygen for growth, which may influence its survival and activity in various environments, particularly in soil, where oxygen availability can fluctuate. Overall, Pseudomonas fuscovaginae strain IRRI 6609 exemplifies the diverse roles that bacteria can play in both ecological systems and agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas asplenii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fuscovaginae strain IRRI 6609
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatagricultural soils; milk; refrigerated raw milk; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fuscovaginae strain IRRI 6609

Gene Summary

Adenine Count

1321105 bp

Thymine Count

1297012 bp

Guanine Count

2232943 bp

Cytosine Count

2283477 bp

Genome Length

7140777 bp

Protein-coding Genes

6082 genes

Non-Coding Genes

367 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domainPF66_02364Not AvailablePositive2584398 - 258542338737.3
dna-binding domain-containing protein, arac-typePF66_02365Not AvailableNegative2585499 - 258647036303.7
anthranilate 1,2-dioxygenase, large subunitPF66_02366Not AvailablePositive2586679 - 258806752694.0
anthranilate 1,2-dioxygenase, small subunitPF66_02367Not AvailablePositive2588064 - 258855519363.7
2-polyprenylphenol hydroxylase-like oxidoreductasePF66_02368Not AvailablePositive2588567 - 258960138123.3
catechol 1,2-dioxygenase, proteobacterialPF66_02369Not AvailablePositive2589634 - 259056033913.4
methyl-accepting chemotaxis sensory transducer with pas/pac sensorPF66_02370Not AvailableNegative2590631 - 259205250809.2
protein involved in meta-pathway of phenol degradationPF66_02371Not AvailableNegative2592133 - 259306534429.4
conserved protein of dim6/ntab familyPF66_02372Not AvailableNegative2593166 - 259369918773.4
hypothetical proteinPF66_02373Not AvailableNegative2593712 - 259495045480.7

Displaying genes 2621 – 2630 of 6449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.