Pseudomonas fuscovaginae strain IRRI 6609

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fuscovaginae strain IRRI 6609 is an aerobic bacterium primarily found in agricultural soils, as well as in milk and refrigerated raw milk. This organism exhibits a single replicon, indicating a streamlined genetic structure that is characteristic of many bacteria within the Pseudomonas genus. The strain is documented under the accession number JSYZ00000000.1. The ecological significance of Pseudomonas fuscovaginae strain IRRI 6609 lies in its potential role in soil health and agricultural practices. As a member of the Pseudomonas genus, this strain may contribute to nutrient cycling within agricultural soils, enhancing soil fertility and supporting plant growth. The presence of this bacterium in milk suggests a possible interaction with dairy production, although specific effects or implications for milk quality have not been detailed in the available data. Understanding the habitat preferences and oxygen requirements of Pseudomonas fuscovaginae strain IRRI 6609 can inform agricultural microbiology and food safety practices. Its aerobic nature indicates a reliance on oxygen for growth, which may influence its survival and activity in various environments, particularly in soil, where oxygen availability can fluctuate. Overall, Pseudomonas fuscovaginae strain IRRI 6609 exemplifies the diverse roles that bacteria can play in both ecological systems and agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas asplenii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas fuscovaginae strain IRRI 6609
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatagricultural soils; milk; refrigerated raw milk; soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas fuscovaginae strain IRRI 6609

Gene Summary

Adenine Count

1321105 bp

Thymine Count

1297012 bp

Guanine Count

2232943 bp

Cytosine Count

2283477 bp

Genome Length

7140777 bp

Protein-coding Genes

6082 genes

Non-Coding Genes

367 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator with hth domain and aminotransferase domainPF66_01006Not AvailableNegative1078955 - 108035551134.9
alkylhydroperoxidase ahpd family core domainPF66_01007Not AvailablePositive1080512 - 108098817255.8
sortase-like acyltransferasePF66_01008Not AvailablePositive1080978 - 108142417228.8
acyl carrier protein phosphodiesterasePF66_01009Not AvailablePositive1081421 - 108202322001.5
methyltransferase domainPF66_01010Not AvailableNegative1082272 - 108354047003.1
amino acid abc transporter membrane protein 2, paat familyPF66_01011Not AvailableNegative1083691 - 108438025832.4
amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine familyPF66_01012Not AvailableNegative1084380 - 108507224921.6
periplasmic component of amino acid abc-type transporter/signal transduction systemPF66_01013Not AvailableNegative1085153 - 108590827816.2
abc-type histidine transport system, atpase componentPF66_01014Not AvailableNegative1085922 - 108669528330.3
gamma-aminobutyrate permeasePF66_01015Not AvailablePositive1087228 - 108861949549.5

Displaying genes 1321 – 1330 of 6449 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.