Pectobacterium fontis strain M022

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium fontis strain M022 is a Gram-negative bacterium, which indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural characteristic is typical of many pathogenic bacteria and can influence their interactions with host organisms and environmental factors. The presence of flagella in Pectobacterium fontis strain M022 suggests that it is motile, allowing it to move toward favorable environments or away from adverse conditions. Motility can be a critical factor in the bacterium's ability to colonize its ecological niche, potentially enhancing its survival and pathogenicity. Pectobacterium fontis strain M022 has a single replicon, which is significant for its genetic stability and replication process. The singular nature of this replicon may simplify its genomic management and replication during cell division, contributing to its adaptability and evolutionary potential. The strain is cataloged under the accession number JSXC00000000.1, which is crucial for researchers seeking to reference its genomic data in further studies or for biotechnological applications. In summary, the key traits of Pectobacterium fontis strain M022—its Gram-negative classification, motility due to flagella, single replicon, and genomic reference—are indicative of its potential ecological roles. Such characteristics may allow it to thrive in various environments, with implications for its behavior in soil ecosystems or its interactions with plant hosts, possibly leading to disease in agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium fontis
Strainstrain M022

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium fontis strain M022 Contig106, whole genome shotgun

Gene Summary

Adenine Count

1004972 bp

Thymine Count

1020177 bp

Guanine Count

1071596 bp

Cytosine Count

1054819 bp

Genome Length

4151564 bp

Protein-coding Genes

3482 genes

Non-Coding Genes

207 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase m4OI69_16635Not AvailableNegative3696596 - 369763338638.4
exodeoxyribonuclease vii large subunitOI69_16640Not AvailableNegative3697864 - 369925852748.4
inosine-5-monophosphate dehydrogenaseOI69_16645Not AvailablePositive3699431 - 370089751798.5
gmp synthaseOI69_16650Not AvailablePositive3701021 - 370259858618.3
choloylglycine hydrolaseOI69_16655Not AvailableNegative3702746 - 370387341447.8
hypothetical proteinOI69_16660Not AvailablePositive3704263 - 370455010482.6
membrane proteinOI69_16670Not AvailablePositive3706062 - 370682927215.5
hypothetical proteinOI69_16675Not AvailablePositive3707043 - 370786131063.9
ethanol-active dehydrogenase/acetaldehyde-active reductaseOI69_16680Not AvailableNegative3707912 - 370892235235.7
membrane proteinOI69_16685Not AvailableNegative3709153 - 371007635109.7

Displaying genes 3301 – 3310 of 3689 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.