Pectobacterium fontis strain M022

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium fontis strain M022 is a Gram-negative bacterium, which indicates that it possesses a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural characteristic is typical of many pathogenic bacteria and can influence their interactions with host organisms and environmental factors. The presence of flagella in Pectobacterium fontis strain M022 suggests that it is motile, allowing it to move toward favorable environments or away from adverse conditions. Motility can be a critical factor in the bacterium's ability to colonize its ecological niche, potentially enhancing its survival and pathogenicity. Pectobacterium fontis strain M022 has a single replicon, which is significant for its genetic stability and replication process. The singular nature of this replicon may simplify its genomic management and replication during cell division, contributing to its adaptability and evolutionary potential. The strain is cataloged under the accession number JSXC00000000.1, which is crucial for researchers seeking to reference its genomic data in further studies or for biotechnological applications. In summary, the key traits of Pectobacterium fontis strain M022—its Gram-negative classification, motility due to flagella, single replicon, and genomic reference—are indicative of its potential ecological roles. Such characteristics may allow it to thrive in various environments, with implications for its behavior in soil ecosystems or its interactions with plant hosts, possibly leading to disease in agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium fontis
Strainstrain M022

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium fontis strain M022 Contig106, whole genome shotgun

Gene Summary

Adenine Count

1004972 bp

Thymine Count

1020177 bp

Guanine Count

1071596 bp

Cytosine Count

1054819 bp

Genome Length

4151564 bp

Protein-coding Genes

3482 genes

Non-Coding Genes

207 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorOI69_15510Not AvailableNegative3441295 - 344199926465.8
2'-5' rna ligaseOI69_15515Not AvailableNegative3442012 - 344254219818.0
atp-dependent helicase hrpbOI69_15520Not AvailablePositive3442635 - 344509790981.6
bifunctional glycosyl transferase/transpeptidaseOI69_15525Not AvailablePositive3445200 - 344766891691.5
membrane proteinOI69_15530Not AvailableNegative3447775 - 344836521399.2
gntr family transcriptional regulatorOI69_15535Not AvailablePositive3448501 - 344996153992.4
glutamate-1-semialdehyde aminotransferaseOI69_15540Not AvailableNegative3450009 - 345128945124.4
iron-sulfur cluster insertion protein erpaOI69_15545Not AvailablePositive3451559 - 345190612200.3
hypothetical proteinOI69_15550Not AvailableNegative3451998 - 34522769531.45
vitamin b12-binding proteinOI69_15555Not AvailableNegative3452508 - 345334730746.7

Displaying genes 3081 – 3090 of 3689 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.