Pseudomonas chlororaphis strain EA105

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain EA105 is a Gram-negative rod-shaped bacterium primarily inhabiting the nodules of *Chamaecytisus albus*, as well as the rhizosphere and root nodules of various plants. This strain has a single replicon and is associated with hosts from the Viridiplantae kingdom, specifically noted for its interaction with *Brassica napus var. napus*. While P. chlororaphis is generally recognized for its beneficial roles in plant health, the pathogenicity of strain EA105 has been observed in animal systems. This dual capability suggests a complex ecological role that may influence both plant health and animal interactions. The ecological significance of Pseudomonas chlororaphis strain EA105 lies in its potential to enhance plant growth and resilience while also navigating interactions with a variety of organisms in its environment. Its presence in the root nodules and rhizosphere indicates a symbiotic relationship with plants, possibly aiding in nutrient acquisition or protection against pathogens. However, its noted pathogenicity in animals underscores the need for further understanding of its ecological dynamics and interactions with different hosts. This complexity may have implications for agricultural practices and the management of plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain EA105

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain EA105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain EA105 contig_74, whole genome

Gene Summary

Adenine Count

1340476 bp

Thymine Count

1349771 bp

Guanine Count

1959372 bp

Cytosine Count

1945287 bp

Genome Length

6595581 bp

Protein-coding Genes

5565 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNZ35_12340Not AvailableNegative2731265 - 273162113782.4
lipoproteinNZ35_12345Not AvailablePositive2731812 - 27320247180.52
arti proteinNZ35_12350Not AvailableNegative2732028 - 273288231414.7
copper resistance protein copdNZ35_12355Not AvailableNegative2732879 - 273374830964.5
copper resistance protein copcNZ35_12360Not AvailableNegative2733752 - 273412613008.1
copper resistance protein copbNZ35_12365Not AvailableNegative2734159 - 273502831753.0
copper oxidaseNZ35_12370Not AvailableNegative2735040 - 273674663432.5
fmn-dependent nadh-azoreductaseNZ35_12375Not AvailableNegative2736800 - 273748025243.1
lysr family transcriptional regulatorNZ35_12380Not AvailablePositive2737580 - 273843430796.3
hypothetical proteinNZ35_12385Not AvailableNegative2738441 - 273891117542.5

Displaying genes 2451 – 2460 of 5714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.