Pseudomonas chlororaphis strain EA105

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas chlororaphis strain EA105 is a Gram-negative rod-shaped bacterium primarily inhabiting the nodules of *Chamaecytisus albus*, as well as the rhizosphere and root nodules of various plants. This strain has a single replicon and is associated with hosts from the Viridiplantae kingdom, specifically noted for its interaction with *Brassica napus var. napus*. While P. chlororaphis is generally recognized for its beneficial roles in plant health, the pathogenicity of strain EA105 has been observed in animal systems. This dual capability suggests a complex ecological role that may influence both plant health and animal interactions. The ecological significance of Pseudomonas chlororaphis strain EA105 lies in its potential to enhance plant growth and resilience while also navigating interactions with a variety of organisms in its environment. Its presence in the root nodules and rhizosphere indicates a symbiotic relationship with plants, possibly aiding in nutrient acquisition or protection against pathogens. However, its noted pathogenicity in animals underscores the need for further understanding of its ecological dynamics and interactions with different hosts. This complexity may have implications for agricultural practices and the management of plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas chlororaphis
Strainstrain EA105

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas chlororaphis strain EA105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnodules of Chamaecytisus albus; rhizosphere; root nodules
Biotic relationshipNot Available
Host(s)Viridiplantae, Brassica napus var. napus, Persea americana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal

Genome Summary

Pseudomonas chlororaphis strain EA105 contig_74, whole genome

Gene Summary

Adenine Count

1340476 bp

Thymine Count

1349771 bp

Guanine Count

1959372 bp

Cytosine Count

1945287 bp

Genome Length

6595581 bp

Protein-coding Genes

5565 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-glucose 6-dehydrogenaseNZ35_09825Not AvailableNegative2175674 - 217705351210.4
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseNZ35_09830Not AvailableNegative2177050 - 217745414730.3
4-amino-4-deoxy-l-arabinose-phospho-udp flippaseNZ35_09835Not AvailableNegative2177451 - 217779512570.0
4-amino-4-deoxy-l-arabinose transferaseNZ35_09840Not AvailableNegative2177792 - 217944462089.2
4-deoxy-4-formamido-l-arabinose-phospho-udp deformylaseNZ35_09845Not AvailableNegative2179441 - 218032532959.4
udp-4-amino-4-deoxy-l-arabinose formyltransferaseNZ35_09850Not AvailableNegative2180325 - 218231673975.4
udp phosphate 4-deoxy-4-formamido-l-arabinose transferaseNZ35_09855Not AvailableNegative2182313 - 218332937585.9
udp-4-amino-4-deoxy-l-arabinose-oxoglutarate aminotransferaseNZ35_09860Not AvailableNegative2183326 - 218447441669.9
integraseNZ35_09865Not AvailablePositive2184829 - 218576735431.3
hypothetical proteinNZ35_09870Not AvailableNegative2185774 - 218632819633.6

Displaying genes 2001 – 2010 of 5714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.