Labrenzia sp. OB1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Labrenzia

Description

Labrenzia sp. OB1 is a bacterial strain characterized by having a single replicon, which suggests a streamlined genomic organization typical of certain bacteria. It is cataloged under the accession number JSEP00000000.1, indicating its entry into genomic databases for further research and reference. This strain represents a member of the genus Labrenzia, which is known for its ecological diversity and adaptability in various environments. While specific traits regarding its metabolism, habitat, or interactions with other microorganisms are not provided, the presence of a single replicon often implies a potential for efficient resource utilization and adaptability to specific ecological niches. The study of Labrenzia sp. OB1 can contribute to our understanding of microbial ecology, particularly in environments where members of the Labrenzia genus thrive. These bacteria are often associated with marine habitats, suggesting that Labrenzia sp. OB1 may play a role in biogeochemical cycles within its ecosystem. Understanding this organism's characteristics could provide insights into its ecological functions, such as nutrient cycling or interactions with other microbial communities. In summary, Labrenzia sp. OB1, with its single replicon and documented accession, represents a microbial entity with potential ecological significance, particularly in marine environments, where it may contribute to the maintenance of ecological balance and nutrient dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusLabrenzia
SpeciesLabrenzia sp. OB1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Labrenzia sp. OB1 scaffold100.1, whole genome shotgun sequence.

Gene Summary

Adenine Count

1221842 bp

Thymine Count

1214739 bp

Guanine Count

1774430 bp

Cytosine Count

1791276 bp

Genome Length

6002354 bp

Protein-coding Genes

5056 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome maturation factor rimmOA90_05865Not AvailableNegative1303977 - 130451919968.4
30s ribosomal protein s16OA90_05870Not AvailableNegative1304607 - 130502315122.0
chorismate mutaseOA90_05875Not AvailableNegative1305042 - 130532610575.7
rna-binding proteinOA90_05880Not AvailableNegative1305368 - 130692754979.2
carboxyvinyl-carboxyphosphonate phosphorylmutaseOA90_05885Not AvailableNegative1307243 - 130812131753.0
c4-dicarboxylate abc transporter permeaseOA90_05890Not AvailableNegative1308134 - 130940544750.2
c4-dicarboxylate abc transporter substrate-binding proteinOA90_05900Not AvailableNegative1310029 - 131102135403.1
potassium transporter trkOA90_05905Not AvailablePositive1311251 - 131269052213.4
hypothetical proteinOA90_05910Not AvailableNegative1312786 - 13130167986.25
alanine racemaseOA90_05915Not AvailableNegative1313327 - 131399824157.0

Displaying genes 1121 – 1130 of 5129 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.