Marinomonas sp. TW1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Marinomonas

Description

Marinomonas sp. TW1 is a notable marine bacterium characterized by its single replicon structure, indicating a streamlined genomic organization. This trait may confer advantages in terms of replication efficiency and adaptability to its marine environment. The bacterium has been cataloged with the accession number JSEE00000000.1, which serves as a reference for research and identification purposes. The isolation of Marinomonas sp. TW1 highlights the diversity of microbial life in marine ecosystems. Members of the Marinomonas genus are typically associated with seawater and sediments, suggesting a potential role in nutrient cycling and the degradation of organic matter in these environments. The presence of such bacteria in marine settings indicates their importance in maintaining ecological balance, particularly in nutrient-poor conditions where they may contribute to the overall microbial loop. In summary, Marinomonas sp. TW1, with its single replicon and established genomic reference, underscores the ecological significance of marine bacteria in nutrient cycling and organic matter decomposition within marine environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusMarinomonas
SpeciesMarinomonas sp. TW1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinomonas sp. TW1 NODE_66, whole genome shotgun sequence.

Gene Summary

Adenine Count

1045684 bp

Thymine Count

1043412 bp

Guanine Count

838727 bp

Cytosine Count

844838 bp

Genome Length

3772873 bp

Protein-coding Genes

3344 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinOA79_15100Not AvailableNegative3202060 - 320256919041.5
Gp09 proteinOA79_15105Not AvailableNegative3202582 - 320315121617.4
hypothetical proteinOA79_15110Not AvailableNegative3203153 - 320350613247.8
hypothetical proteinOA79_15115Not AvailableNegative3203551 - 320454036519.1
hypothetical proteinOA79_15120Not AvailableNegative3204540 - 320487512238.5
Portal proteinOA79_15130Not AvailableNegative3205932 - 320728750481.8
5s ribosomal rnaNot AvailableNot AvailablePositive1 - 76Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive6 - 2920Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive137 - 251Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive262 - 376Not Available

Displaying genes 11 – 20 of 3450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

294 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 294 metabolites

Health Effects

No health effects information available for this bacterium.