Dokdonia donghaensis DSW-1

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Dokdonia

Description

Dokdonia donghaensis DSW-1 is a Gram-negative, rod-shaped bacterium that exhibits aerobic respiration and is classified as mesophilic, with an optimal growth temperature of 29°C. This organism is non-motile and does not form spores, indicating a stable lifestyle in its environment. Dokdonia donghaensis DSW-1 possesses two replicons, which may be indicative of its genetic adaptability and potential for diverse metabolic pathways. The presence of multiple replicons can influence genetic stability and the ability to respond to environmental changes, although specific functions of these replicons in D. donghaensis DSW-1 have not been detailed. The ecological role of Dokdonia donghaensis DSW-1 may involve its participation in marine microbial communities, particularly in nutrient cycling and organic matter degradation, as many members of the Dokdonia genus are known to inhabit oceanic environments. Understanding the traits of D. donghaensis DSW-1 contributes to our knowledge of microbial diversity and the ecological functions of bacteria in marine ecosystems. Accessions for this bacterium include JSAQ00000000.1 and CP015125.1, which provide genetic information for further study. Overall, Dokdonia donghaensis DSW-1 serves as a relevant example of marine bacteria that play a significant role in ocean health and biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusDokdonia
SpeciesDokdonia donghaensis
StrainDSW-1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Dokdonia donghaensis DSW-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dokdonia donghaensis DSW-1 contig00020, whole genome shotgun

Gene Summary

Adenine Count

996583 bp

Thymine Count

996222 bp

Guanine Count

615519 bp

Cytosine Count

610266 bp

Genome Length

3219590 bp

Protein-coding Genes

2719 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna ligaseNV36_04915Not AvailableNegative1115913 - 111790773930.2
porinNV36_04920Not AvailableNegative1117984 - 111868523749.6
log family protein yvddNV36_04925Not AvailableNegative1118832 - 111942821610.6
glutamine methyltransferaseNV36_04930Not AvailableNegative1119481 - 112035032354.7
acetyltransferaseNV36_04935Not AvailableNegative1120347 - 112083217941.7
riboflavin biosynthesis protein ribdNV36_04940Not AvailablePositive1120820 - 112186037904.3
membrane proteinNV36_04945Not AvailablePositive1121857 - 112272631465.5
hypothetical proteinNV36_04950Not AvailablePositive1122913 - 112322111898.8
glucose-1-phosphate thymidylyltransferaseNV36_04955Not AvailableNegative1123236 - 112441143484.4
thioesteraseNV36_04960Not AvailableNegative1124543 - 112500717057.8

Displaying genes 941 – 950 of 5700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.