Candidatus Protochlamydia amoebophila strain EI2 DB44_HJ

Gram-negative

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Parachlamydiales

Family

Parachlamydiaceae

Genus

Candidatus Protochlamydia

Description

Candidatus Protochlamydia amoebophila strain EI2 DB44_HJ is a Gram-negative bacterium characterized by its mesophilic temperature range, indicating optimal growth at moderate temperatures typically found in natural environments. This strain is notable for having a single replicon, which is indicative of its streamlined genomic organization. The biotic relationship of Candidatus Protochlamydia amoebophila is symbiotic, specifically with amoebae, particularly Acanthamoeba sp. This interaction suggests that the bacterium may play a role in the ecological dynamics of its host environment, potentially influencing the behaviors and health of the amoebae. The specific accession number for this strain is JSAN00000000.1, which provides a reference for genomic studies and further characterization. The symbiotic nature of Candidatus Protochlamydia amoebophila highlights its potential importance in microbial ecology, particularly in understanding host-microbe interactions. This relationship may contribute to nutrient cycling within the ecosystem, as well as impact the survival and proliferation of both the bacterium and its amoebic hosts. Understanding such interactions can offer insights into the broader implications of symbiotic relationships in microbial communities and their roles in various environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderParachlamydiales
FamilyParachlamydiaceae
GenusCandidatus Protochlamydia
SpeciesCandidatus Protochlamydia amoebophila
Strainstrain EI2 DB44_HJ

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipSymbiotic
Host(s)Amoeba, Acanthamoeba sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Protochlamydia amoebophila strain EI2 DB44_HJ, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1940 genes

Non-Coding Genes

265 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDB44_CO00060Not AvailableNegative1073038 - 107369125236.2
spermidine/putrescine import atp-binding protein potaDB44_CO00070Not AvailablePositive1074061 - 107518542698.4
spermidine/putrescine transport system permease protein potbDB44_CO00080Not AvailablePositive1075178 - 107604732664.1
spermidine/putrescine transport system permease protein potcDB44_CO00090Not AvailablePositive1076044 - 107681128857.1
spermidine/putrescine-binding periplasmic protein 2DB44_CO00100Not AvailablePositive1076808 - 107785139435.8
hypothetical proteinDB44_CO00110Not AvailableNegative1078748 - 10789487899.22
magnesium transporter mgteDB44_CO00120Not AvailablePositive1079086 - 108045051485.6
l-serine dehydrataseDB44_CO00130Not AvailablePositive1080718 - 108210950871.4
hypothetical proteinDB44_CO00140Not AvailablePositive1082205 - 108299629554.8
pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1DB44_CO00150Not AvailablePositive1083000 - 108466161493.1

Displaying genes 971 – 980 of 2205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.