Vibrio caribbeanicus strain T14

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio caribbeanicus strain T14 is a bacterium that primarily inhabits gravel substrates and the water column. This organism is characterized by having a single replicon, which is a notable trait for its genetic structure. The strain has been cataloged under the accession number JRWR00000000.1, which provides a reference point for genomic studies and further research into its properties. The habitat of Vibrio caribbeanicus strain T14 suggests its potential role in aquatic ecosystems, particularly in environments where gravel is present. This implies that it may contribute to the microbial community dynamics within these habitats, influencing nutrient cycling and interacting with other microorganisms. The presence of Vibrio species in water columns is often associated with various ecological functions, including decomposition and organic matter breakdown. Understanding the specific ecological roles of Vibrio caribbeanicus strain T14 within its habitat can provide insights into its interactions with the surrounding environment and its contributions to the overall health of aquatic systems. The strain's adaptation to a gravel habitat and its presence in the water column highlight its potential importance in maintaining the ecological balance in these environments. Further research may elucidate the specific functions this strain performs in nutrient cycling and its interactions with other microbial inhabitants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio caribbeanicus
Strainstrain T14

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio caribbeanicus strain T14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgravel; water column
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio caribbeanicus strain T14 Contig51, whole genome shotgun

Gene Summary

Adenine Count

1233185 bp

Thymine Count

1227008 bp

Guanine Count

1055672 bp

Cytosine Count

1052818 bp

Genome Length

4568683 bp

Protein-coding Genes

3972 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anhydraseNM09_19585Not AvailablePositive4347478 - 434802619909.9
transcriptional regulatorNM09_19590Not AvailableNegative4348019 - 434828510012.6
shikimate dehydrogenaseNM09_19595Not AvailableNegative4348285 - 434911830165.0
coproporphyrinogen iii oxidaseNM09_19600Not AvailableNegative4349195 - 435011235251.2
trna threonylcarbamoyladenosine biosynthesis protein rimnNM09_19605Not AvailableNegative4350131 - 435068820343.1
n5-carboxyaminoimidazole ribonucleotide mutaseNM09_19610Not AvailablePositive4350881 - 435136616689.2
phosphoribosylaminoimidazole carboxylaseNM09_19615Not AvailablePositive4351371 - 435250440996.8
dna topoisomeraseNM09_19620Not AvailableNegative4352550 - 435314022271.7
hypothetical proteinNM09_19625Not AvailableNegative4353153 - 435363218498.2
dna processing protein dpraNM09_19630Not AvailableNegative4353629 - 435475040063.1

Displaying genes 3841 – 3850 of 4050 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.