Pseudomonas sp. H2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. H2 is characterized by having a single replicon, which is a notable trait that defines its genomic structure. This organism is cataloged under the accession number JRPO00000000.1, indicating its specific genetic sequence has been documented in a public database, facilitating further study and comparison with other Pseudomonas species. The genomic simplicity, with only one replicon, may suggest a streamlined genetic organization that could be advantageous in certain environments. Pseudomonas species are generally known for their metabolic versatility, which allows them to thrive in diverse ecological niches. This adaptability is often attributed to their ability to utilize various carbon sources and exhibit resistance to different environmental stresses. From an ecological perspective, Pseudomonas sp. H2 may play a role in biogeochemical cycles or in the degradation of pollutants, as many members of the Pseudomonas genus are known for their capacity to metabolize complex organic compounds. Understanding the specific traits of Pseudomonas sp. H2, particularly its single replicon, could provide insights into its ecological functions and potential applications in bioremediation or biotechnology. Overall, the genetic characteristics of Pseudomonas sp. H2 highlight its potential significance within microbial communities and its adaptability to various environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. H2
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. H2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. H2 contig00132, whole genome shotgun sequence.

Gene Summary

Adenine Count

1077343 bp

Thymine Count

1087280 bp

Guanine Count

1823488 bp

Cytosine Count

1802295 bp

Genome Length

5790406 bp

Protein-coding Genes

4985 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent hsl protease atp-binding subunit hslu (atp-bindingprotein lapa)MD26_04970Not AvailableNegative1125430 - 11256789442.29
repressorMD26_04975Not AvailableNegative1125846 - 112650223694.4
hypothetical proteinMD26_04980Not AvailablePositive1126843 - 112757126779.6
replication protein pMD26_04985Not AvailablePositive1127568 - 112825124987.2
phage-like proteinMD26_04995Not AvailablePositive1128510 - 112919625147.3
hypothetical proteinMD26_05000Not AvailablePositive1129890 - 113172265294.0
holinMD26_05005Not AvailablePositive1131801 - 113211811589.2
hypothetical proteinMD26_05010Not AvailablePositive1132310 - 11324896310.77
structural protein p5MD26_05015Not AvailablePositive1132591 - 113303716139.4
hypothetical proteinMD26_05020Not AvailableNegative1133142 - 113349812008.4

Displaying genes 981 – 990 of 5052 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.