Peptoniphilus lacrimalis DNF00528

Gram-positiveCoccusanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Tissierellia

Order

Tissierellales

Family

Peptoniphilaceae

Genus

Peptoniphilus

Description

Peptoniphilus lacrimalis DNF00528 is a Gram-positive bacterium characterized by its coccus shape and anaerobic oxygen requirement. This species is notable for the presence of flagella, which may contribute to its motility in anaerobic environments. The organism has a single replicon, indicating a streamlined genetic structure that could influence its adaptability and metabolic capabilities. The accession number associated with Peptoniphilus lacrimalis DNF00528 is JRNL00000000.1, which can be used for further reference in genomic databases. In terms of its ecological role, Peptoniphilus lacrimalis is likely to inhabit anaerobic niches, potentially contributing to the complex microbial communities found in such environments. Its metabolic activities could play a significant role in nutrient cycling and maintaining ecosystem balance in anaerobic conditions. Understanding the traits of Peptoniphilus lacrimalis may provide insights into the dynamics of anaerobic microbial communities and their interactions with other organisms.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassTissierellia
OrderTissierellales
FamilyPeptoniphilaceae
GenusPeptoniphilus
SpeciesPeptoniphilus lacrimalis
StrainDNF00528

Profile

Physiology
Gram staining propertiesPositive
ShapeCoccus
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Peptoniphilus lacrimalis DNF00528
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptoniphilus lacrimalis DNF00528 contig126, whole genome shotgun

Gene Summary

Adenine Count

1127901 bp

Thymine Count

1158058 bp

Guanine Count

597191 bp

Cytosine Count

619980 bp

Genome Length

3503252 bp

Protein-coding Genes

3147 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-layer proteinHMPREF2134_00980Not AvailableNegative218777 - 22076874214.8
siroheme synthaseHMPREF2134_00985Not AvailablePositive220917 - 22167829164.8
cro/cl family transcriptional regulatorHMPREF2134_00990Not AvailablePositive221689 - 22197010665.0
hypothetical proteinHMPREF2134_00995Not AvailableNegative222155 - 2223859017.53
permeaseHMPREF2134_01000Not AvailableNegative222625 - 22387246987.9
hypothetical proteinHMPREF2134_01005Not AvailableNegative223869 - 22450124784.2
hypothetical proteinHMPREF2134_01010Not AvailableNegative224468 - 22530432996.6
methyltransferaseHMPREF2134_01015Not AvailableNegative225308 - 22617432805.7
nicotinate phosphoribosyltransferaseHMPREF2134_01020Not AvailableNegative226228 - 22768254833.0
potassium-transporting atpase subunit aHMPREF2134_01025Not AvailablePositive227844 - 22867732017.3

Displaying genes 311 – 320 of 396 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

190 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm00026123-oxohexadecanoyl-CoAC37H64N7O18P3SChemical structure of 3-oxohexadecanoyl-CoANot available
Average1019.926Da
Monoisotopic1019.324139Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da

Displaying 1–10 of 190 metabolites

Health Effects

No health effects information available for this bacterium.