Actinomyces sp. S6-Spd3

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces sp. S6-Spd3 is a bacterial strain characterized by having a single replicon, which is significant for its genomic organization and replication strategy. The strain is cataloged under the accession number JRMV00000000.1, indicating its entry into public genetic databases for further research and reference. Actinomyces species are known for their role in various ecological niches, particularly in soil and the human microbiome. They are typically associated with the degradation of organic matter and play a role in nutrient cycling. This specific strain, like other members of the Actinomyces genus, may contribute to the complex interactions within microbial communities by participating in the breakdown of complex carbohydrates and other organic compounds. The presence of a single replicon suggests a streamlined genomic architecture that could be advantageous for adaptation to specific environments, potentially leading to efficient resource utilization. Given the ecological roles of Actinomyces, S6-Spd3 may also engage in symbiotic relationships with host organisms or other microbes, contributing to the stability and functionality of its habitat. Understanding the traits of Actinomyces sp. S6-Spd3 can provide insights into its ecological roles and potential applications in biotechnology or medicine, particularly in the context of microbial diversity and function in ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. S6-Spd3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces sp. S6-Spd3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces sp. S6-Spd3 contig286, whole genome shotgun sequence.

Gene Summary

Adenine Count

453311 bp

Thymine Count

447912 bp

Guanine Count

591450 bp

Cytosine Count

598336 bp

Genome Length

2091011 bp

Protein-coding Genes

1763 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isopentenyl-diphosphate delta-isomeraseHMPREF1627_00410Not AvailableNegative42702 - 4315917267.4
trna delta(2)-isopentenylpyrophosphate transferaseHMPREF1627_00415Not AvailableNegative43203 - 4364015783.9
tetr family transcriptional regulatorHMPREF1627_00420Not AvailablePositive43707 - 439258055.77
hypothetical proteinHMPREF1627_00425Not AvailableNegative43909 - 441579352.15
ribonucleotide reductase stimulatory proteinHMPREF1627_00430Not AvailablePositive44591 - 4498914925.2
hypothetical proteinHMPREF1627_00445Not AvailablePositive45777 - 4635621137.8
exodeoxyribonuclease iiiHMPREF1627_00450Not AvailablePositive46357 - 4675515071.6
transcriptional regulatorHMPREF1627_00455Not AvailablePositive46914 - 4745319539.7
lipoate--protein ligaseHMPREF1627_00460Not AvailablePositive47533 - 4813222291.8
penicillin-binding proteinHMPREF1627_00470Not AvailableNegative48910 - 4928813587.0

Displaying genes 61 – 70 of 1817 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.