Actinomyces sp. S4-C9

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Actinomyces

Description

Actinomyces sp. S4-C9 is characterized by its single replicon, indicating a streamlined genomic structure typical of many prokaryotic organisms. The genomic sequence for this strain is available under the accession number JRMU00000000.1, which provides a reference for researchers interested in its genetic composition and potential applications. Actinomyces species are generally known for their role in various ecological niches, particularly in soil and as part of the human microbiome. They are often associated with the breakdown of organic matter, contributing to nutrient cycling in their environments. Understanding the specific traits and genetic makeup of Actinomyces sp. S4-C9 can be crucial for elucidating its functions in these ecosystems. Given its classification within the Actinomyces genus, this strain likely possesses metabolic capabilities that allow it to thrive in diverse environments. The presence of a single replicon may suggest a stability in its genome, which could facilitate adaptation to its ecological niche. This trait is significant, as it may influence how the organism interacts with its surrounding microbiota and its resilience to environmental changes. In summary, Actinomyces sp. S4-C9, with its single replicon and identifiable genomic sequence, represents an important organism within its genus. Its ecological role in nutrient cycling and organic matter decomposition highlights the broader significance of Actinomyces species in maintaining ecosystem health.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusActinomyces
SpeciesActinomyces sp. S4-C9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Actinomyces sp. S4-C9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Actinomyces sp. S4-C9 contig30, whole genome shotgun sequence.

Gene Summary

Adenine Count

438956 bp

Thymine Count

417918 bp

Guanine Count

530286 bp

Cytosine Count

568472 bp

Genome Length

1955632 bp

Protein-coding Genes

1447 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonucleotide-diphosphate reductase subunit betaHMPREF1628_04600Not AvailablePositive1004233 - 100519536572.4
abc transporter permeaseHMPREF1628_04610Not AvailablePositive1007244 - 100832339490.6
permeaseHMPREF1628_04615Not AvailablePositive1008400 - 100920629606.2
hypothetical proteinHMPREF1628_04625Not AvailablePositive1010795 - 101178435771.7
protein tyrosine phosphataseHMPREF1628_04630Not AvailablePositive1011911 - 101243819491.8
excisionaseHMPREF1628_04640Not AvailablePositive1012658 - 101312817842.5
toxin-antitoxin system, toxin component, pin family proteinHMPREF1628_04645Not AvailablePositive1013134 - 101369120714.8
atp-dependent helicase hrpaHMPREF1628_04650Not AvailableNegative1013764 - 1018479172455.0
abc transporter permeaseHMPREF1628_04660Not AvailablePositive1020542 - 102146833100.5
peptide abc transporter permeaseHMPREF1628_04665Not AvailablePositive1021461 - 102241434200.7

Displaying genes 801 – 810 of 1499 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.