Porphyromonas macacae strain COT-192 OH2859

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas macacae strain COT-192 OH2859 is a rod-shaped bacterium primarily found in the gingival crevicular fluid, oral cavity, and subgingival plaque. This species possesses flagella, indicating its potential for motility within its habitat. It has a single replicon, which is characteristic of many bacteria and may relate to its genomic organization and replication processes. This bacterium is associated with Canis lupus familiaris, suggesting that it has a specific ecological role in the oral microbiome of domesticated dogs. The presence of P. macacae in subgingival plaque indicates its involvement in the complex microbial communities that reside in the oral cavity, potentially influencing dental health and disease processes such as periodontal disease. The accession number JRFA00000000.1 provides a reference for further genomic studies and characterization of this strain, which may help elucidate its pathogenic potential or beneficial roles within the canine oral microbiome. Understanding the interaction of P. macacae with its host and other microbial inhabitants can provide insights into oral health management in dogs and the ecological dynamics at play in their oral environments. Through continued research, the implications of P. macacae in canine oral health may become clearer, contributing to better veterinary practices and pet care.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas macacae
Strainstrain COT-192 OH2859

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgingival crevicular fluid; oral cavity; subgingival plaque
Biotic relationshipNot Available
Host(s)Canis lupus familiaris
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas macacae strain COT-192 OH2859 contig_32, whole

Gene Summary

Adenine Count

664606 bp

Thymine Count

678111 bp

Guanine Count

521491 bp

Cytosine Count

499034 bp

Genome Length

2363316 bp

Protein-coding Genes

1843 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-thrNot AvailableNot AvailablePositive1252274 - 1252345Not Available
elongation factor tuHQ47_05640Not AvailablePositive1252401 - 125358843620.5
Trna-trpNot AvailableNot AvailablePositive1253648 - 1253723Not Available
preprotein translocase subunit seceHQ47_05650Not AvailablePositive1253737 - 12539407646.56
antitermination protein nusgHQ47_05655Not AvailablePositive1253953 - 125449220125.4
50s ribosomal protein l11HQ47_05660Not AvailablePositive1254561 - 125500115697.1
50s ribosomal protein l1HQ47_05665Not AvailablePositive1255016 - 125571124898.3
50s ribosomal protein l10HQ47_05670Not AvailablePositive1255733 - 125625719210.2
50s ribosomal protein l7/l12HQ47_05675Not AvailablePositive1256296 - 125667312724.3
dna-directed rna polymerase subunit betaHQ47_05680Not AvailablePositive1256785 - 1260594142675.0

Displaying genes 981 – 990 of 1895 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.