Porphyromonas sp. COT-290 OH860

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas sp. COT-290 OH860 is a rod-shaped bacterium that possesses flagella, which indicates it has the capability for motility. The presence of flagella can play a significant role in the organism's ability to navigate its environment, potentially aiding in colonization or interaction with other microorganisms. This strain has one replicon, suggesting that it possesses a single circular chromosome, a common feature among many bacterial species. The genetic information for Porphyromonas sp. COT-290 OH860 is cataloged under the accession number JRAR00000000.1, which serves as a reference for researchers seeking genomic data related to this organism. In terms of ecological significance, members of the genus Porphyromonas are often associated with various ecological niches, particularly within the human oral cavity and gastrointestinal tract. They are known for their roles in the breakdown of complex organic materials and may be involved in interactions with host tissues and other microbial communities. Understanding the specific traits of Porphyromonas sp. COT-290 OH860, such as its rod shape and motility, can provide insights into its ecological roles and potential implications in health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas sp. COT-290 OH860
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas sp. COT-290 OH860 contig_82, whole genome shotgun

Gene Summary

Adenine Count

585395 bp

Thymine Count

593458 bp

Guanine Count

584439 bp

Cytosine Count

579752 bp

Genome Length

2343073 bp

Protein-coding Genes

1619 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase m24HQ41_07665Not AvailablePositive1853853 - 185487537626.2
phosphoribosylformylglycinamidine synthaseHQ41_07670Not AvailablePositive1855027 - 1858731135225.0
peptidase s9HQ41_07675Not AvailableNegative1858811 - 186077874409.4
hypothetical proteinHQ41_07680Not AvailableNegative1860884 - 186181336749.4
lactoylglutathione lyaseHQ41_07685Not AvailableNegative1861835 - 186221815251.0
Trna-valNot AvailableNot AvailablePositive1862387 - 1862464Not Available
udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseHQ41_07695Not AvailableNegative1862600 - 186371240380.2
udp-n-acetylmuramoylalanine--d-glutamate ligaseHQ41_07705Not AvailableNegative1864976 - 186635251051.7
aspartate carbamoyltransferaseHQ41_07720Not AvailablePositive1867234 - 186814534519.2
aspartate carbamoyltransferaseHQ41_07725Not AvailablePositive1868181 - 186863917349.5

Displaying genes 1321 – 1330 of 1669 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.