Solemya velum gill symbiont strain WH

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

Solemya velum gill symbiont strain WH is characterized by having a single replicon. This trait is significant in understanding its genomic structure and potential evolutionary adaptations. The strain is cataloged under the accession number JRAA00000000.1, which provides a reference for researchers looking to study its genetic makeup and symbiotic functions. The gill symbionts of Solemya velum are important in the context of their ecological niche, particularly in marine environments where they inhabit deep-sea ecosystems. These symbionts play a crucial role in nutrient cycling and energy acquisition for their host, utilizing chemosynthesis to convert inorganic compounds into organic matter. This is particularly vital in environments lacking sunlight, where traditional photosynthesis cannot occur. The reliance of Solemya velum on its gill symbionts highlights the intricate relationships within marine ecosystems, demonstrating how species adapt to their environments through symbiotic partnerships. Understanding the genomic characteristics, such as the single replicon structure of strain WH, can provide insights into the metabolic capabilities and ecological roles of these symbionts. Overall, Solemya velum and its gill symbionts exemplify the complexity of life in extreme habitats, emphasizing the importance of microbial symbiosis in sustaining marine biodiversity and ecosystem function.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solemya velum gill symbiont strain WH SV_sym_Scaffold_10, whole

Gene Summary

Adenine Count

664253 bp

Thymine Count

659743 bp

Guanine Count

686615 bp

Cytosine Count

691739 bp

Genome Length

2702377 bp

Protein-coding Genes

2716 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine-r-sulfoxide reductaseJV46_14450Not AvailableNegative599284 - 59969415257.5
bacterial translation initiation factor 1JV46_21250Not AvailablePositive599788 - 6000068242.98
atp-dependent clp protease, atp-binding subunit clpaJV46_14460Not AvailableNegative599987 - 60224883259.5
hypothetical proteinJV46_14470Not AvailableNegative602255 - 60257512383.8
cold-shock dna-binding proteinJV46_21270Not AvailablePositive602859 - 6030657472.81
isocitrate dehydrogenase (nadp)JV46_14480Not AvailableNegative603146 - 60440545794.8
ribosomal large subunit pseudouridine synthase eJV46_21290Not AvailablePositive604506 - 60505720687.2
hypothetical proteinJV46_21300Not AvailablePositive605124 - 60575023339.5
hypothetical proteinJV46_21310Not AvailablePositive605764 - 60632421097.2
trna (5-methylaminomethyl-2-thiouridylate)-methyltransferaseJV46_21320Not AvailablePositive606321 - 60741240714.0

Displaying genes 621 – 630 of 2758 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.