Solemya velum gill symbiont strain WH

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

Solemya velum gill symbiont strain WH is characterized by having a single replicon. This trait is significant in understanding its genomic structure and potential evolutionary adaptations. The strain is cataloged under the accession number JRAA00000000.1, which provides a reference for researchers looking to study its genetic makeup and symbiotic functions. The gill symbionts of Solemya velum are important in the context of their ecological niche, particularly in marine environments where they inhabit deep-sea ecosystems. These symbionts play a crucial role in nutrient cycling and energy acquisition for their host, utilizing chemosynthesis to convert inorganic compounds into organic matter. This is particularly vital in environments lacking sunlight, where traditional photosynthesis cannot occur. The reliance of Solemya velum on its gill symbionts highlights the intricate relationships within marine ecosystems, demonstrating how species adapt to their environments through symbiotic partnerships. Understanding the genomic characteristics, such as the single replicon structure of strain WH, can provide insights into the metabolic capabilities and ecological roles of these symbionts. Overall, Solemya velum and its gill symbionts exemplify the complexity of life in extreme habitats, emphasizing the importance of microbial symbiosis in sustaining marine biodiversity and ecosystem function.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Solemya velum gill symbiont strain WH SV_sym_Scaffold_10, whole

Gene Summary

Adenine Count

664253 bp

Thymine Count

659743 bp

Guanine Count

686615 bp

Cytosine Count

691739 bp

Genome Length

2702377 bp

Protein-coding Genes

2716 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protoheme ix farnesyltransferaseJV46_24540Not AvailableNegative2132523 - 213344633597.3
putative cytochrome oxidase assembly proteinJV46_24550Not AvailableNegative2133498 - 213449036226.8
hypothetical proteinJV46_24590Not AvailableNegative2134554 - 213515322529.5
hypothetical proteinJV46_24650Not AvailableNegative2135153 - 213589328001.3
hypothetical proteinJV46_27380Not AvailablePositive2135963 - 21361667216.24
heme/copper-type cytochrome/quinol oxidase, subunit 3JV46_24770Not AvailableNegative2136234 - 213710932897.8
cytochrome oxidase assembly factorJV46_24780Not AvailableNegative2137176 - 213774520927.0
hypothetical proteinJV46_24810Not AvailableNegative2137742 - 21378674455.71
aa3-type cytochrome c oxidase coxab, subunit aJV46_24840Not AvailableNegative2137917 - 213953059662.4
cytochrome cJV46_24920Not AvailableNegative2139546 - 213995914356.9

Displaying genes 2201 – 2210 of 2758 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.