Smithella sp. SCADC

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophia

Order

Syntrophales

Family

Smithellaceae

Genus

Smithella

Description

Smithella sp. SCADC is a member of the genus Smithella, characterized by having a single replicon. This trait is significant as it may influence the organism's genetic stability and replication dynamics. The genomic data for Smithella sp. SCADC is accessible through the accession number JQDQ00000000.1, which allows for further examination of its genetic features and potential functional capabilities. Understanding the genomic structure and traits of Smithella sp. SCADC can provide insights into its ecological role, especially in environments where similar microorganisms are present. Given the characteristics of the genus Smithella, this organism may play a role in anaerobic environments, potentially contributing to processes such as organic matter degradation and nutrient cycling. Further research into Smithella sp. SCADC could illuminate its interactions within microbial communities and its adaptations to specific ecological niches. The single replicon trait could also be compared to other microorganisms to understand the evolutionary pressures that shape genomic organization and function in different environments. Overall, Smithella sp. SCADC presents an interesting subject for studying microbial ecology and evolution, particularly in terms of its role in anaerobic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassSyntrophia
OrderSyntrophales
FamilySmithellaceae
GenusSmithella
SpeciesSmithella sp. SCADC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Smithella sp. SCADC contig_686, whole genome shotgun sequence.

Gene Summary

Adenine Count

926207 bp

Thymine Count

933700 bp

Guanine Count

725678 bp

Cytosine Count

739897 bp

Genome Length

3325482 bp

Protein-coding Genes

2793 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylmalonyl-coa mutaseER57_00205Not AvailablePositive28528 - 2893514216.3
methylmalonyl-coa mutase, large subunitER57_00210Not AvailablePositive28956 - 3070464744.5
hypothetical proteinER57_00215Not AvailablePositive30850 - 3181234898.5
mmg/prpd family proteinER57_00220Not AvailablePositive31809 - 3315248021.2
glycyl-radical activating proteinER57_00224Not AvailablePositive33216 - 3420237276.6
putative alkylsuccinate synthase gamma-subunitER57_00225Not AvailablePositive34326 - 344906142.4
putative alkylsuccinate synthase alpha-subunitER57_00227Not AvailablePositive34568 - 3707594064.1
putative alkylsuccinate synthase beta-subunitER57_00240Not AvailablePositive37154 - 3752213864.3
putative mase-like proteinER57_00245Not AvailablePositive37561 - 377767782.31
16s ribosomal rnaNot AvailableNot AvailablePositive37729 - 39297Not Available

Displaying genes 31 – 40 of 2848 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.