Companilactobacillus kimchiensis strain DSM 24716

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Companilactobacillus

Description

Companilactobacillus kimchiensis strain DSM 24716 is characterized by its rod shape and the presence of flagella. This strain is notable for having a single replicon, which is significant in the context of its genetic organization and stability. The strain is identified with the accession number JQCF00000000.1, indicating its inclusion in genetic databases for further research and reference. The flagella presence suggests that Companilactobacillus kimchiensis may possess motility, which can play a role in its ecological interactions and colonization in various environments, including fermented foods such as kimchi. The ability to move may allow this strain to adapt to dynamic conditions found in its native habitats. Understanding the traits of Companilactobacillus kimchiensis, particularly its shape and motility, provides insights into its functionality within microbial communities. The rod shape may facilitate efficient nutrient uptake and interaction with other microorganisms. Additionally, the presence of only one replicon might indicate a streamlined genetic structure, potentially allowing for a faster response to environmental changes. Overall, these traits contribute to the ecological roles that Companilactobacillus kimchiensis may play in fermentation processes and its impact on food microbiota.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusCompanilactobacillus
SpeciesCompanilactobacillus kimchiensis
Strainstrain DSM 24716

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Companilactobacillus kimchiensis strain DSM 24716 Scaffold71,

Gene Summary

Adenine Count

871559 bp

Thymine Count

869778 bp

Guanine Count

473578 bp

Cytosine Count

483802 bp

Genome Length

2698724 bp

Protein-coding Genes

2477 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinIV57_GL000992P36921Negative396229 - 39663315550.6
hypothetical proteinIV57_GL000993Not AvailablePositive396640 - 39705915980.8
formate--tetrahydrofolate ligaseIV57_GL000994Q38X32Positive397034 - 39872861105.7
signal peptidase ii (lipoprotein signal peptidase) (prolipoprotein signal peptidase)IV57_GL000995Q834D8Positive398728 - 39919217471.8
pseudouridine synthaseIV57_GL000996Not AvailablePositive399173 - 40008734420.5
pyrimidine operon attenuation protein uracil phosphoribosyltransferaseIV57_GL000997Q03S48Positive400160 - 40071720862.4
carbamoyl phosphate synthase small subunitIV57_GL000998Q9L4N5Positive400743 - 40183139834.5
carbamoyl phosphate synthase large subunitIV57_GL000999Q1WVA9Positive401822 - 40422491069.1
persistent rna dna binding proteinIV57_GL001000A0A0H2ZPC8Negative404377 - 40604463009.1
hypothetical proteinIV57_GL001001Q927X9Positive406132 - 40704633847.7

Displaying genes 411 – 420 of 2560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

122 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 122 metabolites

Health Effects

No health effects information available for this bacterium.