Companilactobacillus kimchiensis strain DSM 24716

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Companilactobacillus

Description

Companilactobacillus kimchiensis strain DSM 24716 is characterized by its rod shape and the presence of flagella. This strain is notable for having a single replicon, which is significant in the context of its genetic organization and stability. The strain is identified with the accession number JQCF00000000.1, indicating its inclusion in genetic databases for further research and reference. The flagella presence suggests that Companilactobacillus kimchiensis may possess motility, which can play a role in its ecological interactions and colonization in various environments, including fermented foods such as kimchi. The ability to move may allow this strain to adapt to dynamic conditions found in its native habitats. Understanding the traits of Companilactobacillus kimchiensis, particularly its shape and motility, provides insights into its functionality within microbial communities. The rod shape may facilitate efficient nutrient uptake and interaction with other microorganisms. Additionally, the presence of only one replicon might indicate a streamlined genetic structure, potentially allowing for a faster response to environmental changes. Overall, these traits contribute to the ecological roles that Companilactobacillus kimchiensis may play in fermentation processes and its impact on food microbiota.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusCompanilactobacillus
SpeciesCompanilactobacillus kimchiensis
Strainstrain DSM 24716

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Companilactobacillus kimchiensis strain DSM 24716 Scaffold71,

Gene Summary

Adenine Count

871559 bp

Thymine Count

869778 bp

Guanine Count

473578 bp

Cytosine Count

483802 bp

Genome Length

2698724 bp

Protein-coding Genes

2477 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine synthase aIV57_GL001280Q035B5Positive2170720 - 217146328000.5
50s ribosomal protein l13IV57_GL001281Q03EE8Positive2171592 - 217203516295.7
30s ribosomal protein s9IV57_GL001282Q38UV5Positive2172049 - 217244114301.3
gcn5-related n-acetyltransferaseIV57_GL001283Not AvailablePositive2172530 - 217303318921.6
hypothetical proteinIV57_GL001285Not AvailableNegative2173514 - 217582683327.7
3-oxoacyl-[acyl-carrier-protein] reductaseIV57_GL001286Q8KWT4Negative2176053 - 217680827294.9
iclr family transcriptional regulatorIV57_GL001287A1B8Z4Negative2176820 - 217754827009.6
amino acid transporterIV57_GL001288Not AvailableNegative2177641 - 217903250210.5
aminotransferaseIV57_GL001289Q08432Positive2179180 - 218034944164.2
aec family permeaseIV57_GL001290Not AvailableNegative2180694 - 218163234703.4

Displaying genes 2071 – 2080 of 2560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

122 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 122 metabolites

Health Effects

No health effects information available for this bacterium.