Limosilactobacillus secaliphilus strain DSM 17896

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Limosilactobacillus

Description

Limosilactobacillus secaliphilus strain DSM 17896 is characterized as a rod-shaped bacterium. This strain possesses flagella, which may contribute to its motility in various environments. Genomically, it contains a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number JQBW00000000.1, which serves as a reference for further genomic and taxonomic studies. The presence of flagella suggests that Limosilactobacillus secaliphilus strain DSM 17896 may play a role in its ecological niche by enhancing its ability to navigate through diverse habitats, potentially influencing its interactions with other microorganisms and host organisms. Understanding the characteristics of this strain, particularly its morphology and motility, can provide insights into its ecological roles, such as its contribution to microbial communities in various environments. The presence of a single replicon might also indicate a level of evolutionary specialization, allowing it to thrive in specific ecological contexts. Overall, Limosilactobacillus secaliphilus strain DSM 17896 exemplifies the diversity of microbial life and its capacity to adapt to specific ecological niches.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLimosilactobacillus
SpeciesLimosilactobacillus secaliphilus
Strainstrain DSM 17896

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limosilactobacillus secaliphilus strain DSM 17896 NODE_43, whole

Gene Summary

Adenine Count

429254 bp

Thymine Count

431407 bp

Guanine Count

381906 bp

Cytosine Count

403536 bp

Genome Length

1646143 bp

Protein-coding Genes

1467 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
small heat shock proteinIV45_GL000248Q4UKR8Negative675287 - 67570916257.0
peptidoglycan-binding lysmIV45_GL000249Not AvailableNegative676029 - 67665821613.6
ncs2 family nucleobase cation symporter-2IV45_GL000250O32140Negative677184 - 67852746385.0
fes assembly protein sufbIV45_GL000251Q49W57Negative678680 - 68009853012.9
fes assembly protein sufdIV45_GL000252O32165Negative680095 - 68124942285.3
fes assembly atpase sufcIV45_GL000253P80866Negative681252 - 68201327854.9
anaerobic ribonucleoside-triphosphate reductase activating proteinIV45_GL000254P0A9N9Negative682030 - 68261722842.2
anaerobic ribonucleoside-triphosphate reductaseIV45_GL000255Q9L646Negative682696 - 68493085289.8
glutamate abc transporter permeaseIV45_GL000256Not AvailableNegative685318 - 68601025271.7
amino acid abc transporterIV45_GL000257P0AEQ5Negative686044 - 68689231248.0

Displaying genes 641 – 650 of 1526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

78 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da

Displaying 1–10 of 78 metabolites

Health Effects

No health effects information available for this bacterium.