Limosilactobacillus secaliphilus strain DSM 17896

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Limosilactobacillus

Description

Limosilactobacillus secaliphilus strain DSM 17896 is characterized as a rod-shaped bacterium. This strain possesses flagella, which may contribute to its motility in various environments. Genomically, it contains a single replicon, indicating a streamlined genetic architecture that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number JQBW00000000.1, which serves as a reference for further genomic and taxonomic studies. The presence of flagella suggests that Limosilactobacillus secaliphilus strain DSM 17896 may play a role in its ecological niche by enhancing its ability to navigate through diverse habitats, potentially influencing its interactions with other microorganisms and host organisms. Understanding the characteristics of this strain, particularly its morphology and motility, can provide insights into its ecological roles, such as its contribution to microbial communities in various environments. The presence of a single replicon might also indicate a level of evolutionary specialization, allowing it to thrive in specific ecological contexts. Overall, Limosilactobacillus secaliphilus strain DSM 17896 exemplifies the diversity of microbial life and its capacity to adapt to specific ecological niches.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLimosilactobacillus
SpeciesLimosilactobacillus secaliphilus
Strainstrain DSM 17896

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limosilactobacillus secaliphilus strain DSM 17896 NODE_43, whole

Gene Summary

Adenine Count

429254 bp

Thymine Count

431407 bp

Guanine Count

381906 bp

Cytosine Count

403536 bp

Genome Length

1646143 bp

Protein-coding Genes

1467 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine threonine protein kinaseIV45_GL000140O34507Negative575718 - 57764671271.6
protein serine threonine phosphataseIV45_GL000141Q71YJ5Negative577650 - 57833024910.8
ribosomal rna small subunit methyltransferase bIV45_GL000142P94464Negative578414 - 57971247845.0
methionyl-trna formyltransferaseIV45_GL000143B2GD55Negative579744 - 58067633884.1
primosomal replication protein nIV45_GL000144P94461Negative580723 - 58314691642.9
phosphopantothenoylcysteine decarboxylase phosphopantothenate-cysteine ligaseIV45_GL000145O35033Negative583160 - 58435943231.3
dna-directed rna polymerase, omega subunitIV45_GL000146B2GD58Negative584444 - 58471910458.4
guanylate kinaseIV45_GL000147Q88WL7Negative584716 - 58532122925.8
hypothetical proteinIV45_GL000148Not AvailablePositive585526 - 58584912506.1
dna repair protein recnIV45_GL000149Q9K974Negative585961 - 58764062850.7

Displaying genes 531 – 540 of 1526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

78 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da

Displaying 1–10 of 78 metabolites

Health Effects

No health effects information available for this bacterium.