Achromobacter sp. RTa

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Alcaligenaceae

Genus

Achromobacter

Description

Achromobacter sp. RTa is characterized by the presence of flagella, which suggests that it possesses motility capabilities. This trait is significant for its ecological interactions and potential adaptations in various environments. The organism has a single replicon, indicating a streamlined genetic structure that may enhance stability and replication efficiency. The genomic data for Achromobacter sp. RTa is recorded under the accession JPYO00000000.1, which can be referenced for further genetic and taxonomic studies. The presence of a single replicon can imply a simpler genomic architecture compared to organisms with multiple replicons, potentially influencing its growth rates and adaptability. In terms of ecological insight, the presence of flagella allows Achromobacter sp. RTa to navigate its environment effectively, which may facilitate its survival in diverse habitats. This motility may be crucial for accessing nutrients, escaping unfavorable conditions, or engaging in interactions with other microorganisms. Understanding these traits can aid in appreciating the role of Achromobacter sp. RTa within its ecosystem, particularly in its ability to thrive in varied environments and its potential applications in biotechnology or bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyAlcaligenaceae
GenusAchromobacter
SpeciesAchromobacter sp. RTa
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Achromobacter sp. RTa CONTIG.262, whole genome shotgun sequence.

Gene Summary

Adenine Count

1079726 bp

Thymine Count

1081374 bp

Guanine Count

2151422 bp

Cytosine Count

2161376 bp

Genome Length

6476495 bp

Protein-coding Genes

5638 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidaseJL37_00030Not AvailableNegative3889 - 475231652.5
transglutaminaseJL37_00035Not AvailableNegative4863 - 566629019.3
hypothetical proteinJL37_00040Not AvailableNegative5693 - 666437008.1
hypothetical proteinJL37_00045Not AvailableNegative6667 - 810052958.3
5-formyltetrahydrofolate cyclo-ligaseJL37_00050Not AvailableNegative8526 - 920024587.2
lytic transglycosylaseJL37_00055Not AvailablePositive9314 - 1144378610.6
trna cca-pyrophosphorylaseJL37_00060Not AvailablePositive11440 - 1255840327.6
hypothetical proteinJL37_00065Not AvailableNegative12553 - 1374042162.3
rna helicaseJL37_00070Not AvailableNegative13877 - 1564364005.7
uracil-dna glycosylaseJL37_00075Not AvailableNegative15901 - 1666227170.5

Displaying genes 31 – 40 of 5713 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.