Kingdom
Pseudomonadati
Phylum
Campylobacterota
Class
Epsilonproteobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Campylobacterota |
| Class | Epsilonproteobacteria |
| Order | Campylobacterales |
| Family | Helicobacteraceae |
| Genus | Helicobacter |
| Species | Helicobacter pylori |
| Strain | strain YN4-84 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Microaerophilic |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Aves |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
499109 bp
Thymine Count
495525 bp
Guanine Count
313113 bp
Cytosine Count
314665 bp
Genome Length
1633405 bp
Protein-coding Genes
1427 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna methyltransferase | JM68_05735 | Not Available | Negative | 1101848 - 1102711 | 32793.2 |
| 50s ribosomal protein l31 | JM68_05740 | Not Available | Negative | 1102736 - 1102939 | 7652.32 |
| transcription termination factor rho | JM68_05745 | Not Available | Positive | 1103198 - 1104514 | 49526.6 |
| glutamate racemase | JM68_05750 | Not Available | Positive | 1104551 - 1105318 | 28361.7 |
| cytochrome c oxidase subunit ii | JM68_05755 | Not Available | Negative | 1105805 - 1109353 | 132151.0 |
| cag pathogenicity island protein | JM68_05760 | Not Available | Positive | 1109609 - 1109836 | 9017.09 |
| sodium:calcium antiporter | JM68_05765 | Not Available | Positive | 1110006 - 1110353 | 12000.0 |
| sodium:calcium antiporter | JM68_05770 | Not Available | Positive | 1110355 - 1110978 | 24069.0 |
| transporter | JM68_05775 | Not Available | Positive | 1110987 - 1113938 | 111983.0 |
| sodium:calcium antiporter | JM68_05780 | Not Available | Positive | 1113940 - 1114746 | 31695.4 |
Pathways
1083 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chronic gastric inflammation | Causes | PMC10226649 |
| Gastric cancer | Causes | PMC10226649 |
| Gastric ulcers | Causes | PMC10420633 |
| Stomach carcinoma | Causes | PMC10420633 |
| Ulcers | Causes | PMC10420633 |
| Adenocarcinoma | Causes | PMC10420633 |
| Mucosa-associated lymphoid tissue lymphoma | Causes | PMC10420633 |
| Gerd | Causes | PMC10712878 |
| Gastritis | Causes | PMC10712878 |
| Gastric cancer | Causes | PMC10732068 |







