Thalassospira profundimaris strain PR54-5

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira profundimaris strain PR54-5 is a Gram-negative bacterium characterized by its rod-shaped morphology. It possesses a single replicon, which is a defining feature that can influence its genetic stability and replication process. The strain has been cataloged with the accession number JPWI00000000.1, providing a reference for its genetic sequence and related studies. In terms of ecological significance, Thalassospira profundimaris is likely to play a role in marine environments, particularly in deep-sea ecosystems, given its specific taxonomy. The genus Thalassospira is known to be associated with oceanic habitats, which may suggest that strain PR54-5 contributes to nutrient cycling and organic matter degradation in its natural habitat. The isolation and characterization of such marine bacteria are crucial for understanding microbial diversity and the ecological dynamics of deep-sea environments. These organisms may also hold potential for biotechnological applications, particularly in the context of bioremediation or bioenergy production, although further research would be necessary to explore these possibilities. The unique traits of Thalassospira profundimaris strain PR54-5 underline its importance in the study of marine microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira profundimaris
Strainstrain PR54-5

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira profundimaris strain PR54-5 contig39, whole genome

Gene Summary

Adenine Count

1064524 bp

Thymine Count

1090187 bp

Guanine Count

1290490 bp

Cytosine Count

1238914 bp

Genome Length

4684115 bp

Protein-coding Genes

3976 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap dicarboxylate transporter subunit dctmTH30_05135Not AvailablePositive1077913 - 107967960646.1
hypothetical proteinTH30_05140Not AvailableNegative1079746 - 10799376564.41
membrane proteinTH30_05145Not AvailableNegative1080072 - 108125642986.2
hypothetical proteinTH30_05155Not AvailablePositive1082619 - 108357536082.8
hypothetical proteinTH30_05160Not AvailableNegative1083676 - 108435325517.3
hypothetical proteinTH30_05165Not AvailablePositive1084625 - 108535925861.8
dna utilization protein yhirTH30_05175Not AvailablePositive1086365 - 108725233475.2
anti-ecf sigma factorTH30_05180Not AvailableNegative1087324 - 108802825615.0
rna polymerase sigma factor rpoeTH30_05185Not AvailableNegative1088025 - 108866023699.6
nadh-ubiquinone oxidoreductase subunit 6TH30_05190Not AvailablePositive1088829 - 109017249882.0

Displaying genes 921 – 930 of 4034 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.