Thalassospira profundimaris strain PB8B

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira profundimaris strain PB8B is a Gram-negative, rod-shaped bacterium. This strain is characterized by a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The genomic sequence of this strain is available under the accession JPWE00000000.1, providing a resource for further study and analysis. The classification of T. profundimaris within the Thalassospira genus suggests that it may be associated with marine environments, as the genus is typically found in such habitats. The rod shape of the bacterium could be advantageous for motility in aquatic environments, potentially influencing its ecological interactions and nutrient acquisition strategies. The presence of this strain in marine ecosystems highlights the diversity of microbial life in oceanic environments and underscores the importance of such microorganisms in biogeochemical cycles. Their roles in nutrient cycling, organic matter decomposition, and interactions with other marine life can have significant implications for ecosystem health and functioning. Understanding the traits and genetic makeup of T. profundimaris strain PB8B may provide insights into its ecological roles and potential applications in biotechnology or environmental monitoring.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira profundimaris
Strainstrain PB8B

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira profundimaris strain PB8B contig34, whole genome

Gene Summary

Adenine Count

1053461 bp

Thymine Count

1049123 bp

Guanine Count

1273484 bp

Cytosine Count

1286027 bp

Genome Length

4662095 bp

Protein-coding Genes

3987 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-4-dehydrorhamnose 3,5-epimeraseTH15_06060Not AvailablePositive1277338 - 127798824494.9
hypothetical proteinTH15_06065Not AvailableNegative1278219 - 127913333061.1
mannonate dehydrataseTH15_06075Not AvailableNegative1280585 - 128180245073.9
gntr family transcriptional regulatorTH15_06080Not AvailablePositive1281930 - 128264326990.2
c4-dicarboxylate abc transporterTH15_06085Not AvailablePositive1282669 - 128364635732.5
c4-dicarboxylate abc transporter substrate-binding proteinTH15_06090Not AvailablePositive1283703 - 128421218198.0
c4-dicarboxylate abc transporter permeaseTH15_06095Not AvailablePositive1284209 - 128548344224.7
phosphoesteraseTH15_06100Not AvailablePositive1285487 - 128653036637.1
creatininaseTH15_06105Not AvailableNegative1286590 - 128779244619.9
penicillin-binding proteinTH15_06110Not AvailablePositive1288164 - 129009571897.8

Displaying genes 1091 – 1100 of 4024 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.