Thalassospira profundimaris strain R4-5

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira profundimaris strain R4-5 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which is relevant for its genetic stability and replication processes. The genomic data for Thalassospira profundimaris strain R4-5 is cataloged under the accession number JPWC00000000.1. The classification of Thalassospira profundimaris within the Thalassospira genus suggests its adaptation to marine environments, specifically deep-sea habitats. The Gram-negative nature of this bacterium indicates that it possesses a thin peptidoglycan layer and an outer membrane, traits common among marine microorganisms that may contribute to their survival in harsh conditions. The ecological role of Thalassospira profundimaris strain R4-5, while not detailed here, can be inferred to involve interactions within its marine ecosystem. Gram-negative bacteria often participate in biogeochemical cycles, including nutrient recycling and organic matter decomposition. Consequently, Thalassospira profundimaris may play a significant role in the microbial community dynamics of deep-sea environments, influencing nutrient availability and supporting the overall functioning of marine ecosystems. Further studies would be needed to elucidate its specific ecological interactions and functional capabilities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira profundimaris
Strainstrain R4-5

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira profundimaris strain R4-5 contig42, whole genome

Gene Summary

Adenine Count

1012525 bp

Thymine Count

1006943 bp

Guanine Count

1230208 bp

Cytosine Count

1243730 bp

Genome Length

4493406 bp

Protein-coding Genes

3760 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosyl-atp pyrophosphataseTH8_01800Not AvailableNegative368836 - 36916211524.6
imidazole glycerol phosphate synthaseTH8_01805Not AvailableNegative369167 - 36992827041.3
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseTH8_01810Not AvailableNegative369952 - 37068025157.9
acetyltransferaseTH8_01815Not AvailableNegative370677 - 37124020571.6
imidazole glycerol phosphate synthaseTH8_01820Not AvailableNegative371228 - 37187823178.7
hypothetical proteinTH8_01825Not AvailableNegative371875 - 37231816392.1
imidazoleglycerol-phosphate dehydrataseTH8_01830Not AvailableNegative372393 - 37299222229.5
cell division protein ficTH8_01835Not AvailableNegative373102 - 37421741703.5
adenine deaminaseTH8_01840Not AvailableNegative374321 - 37605161580.3
atp-dependent protease subunit hslvTH8_01845Not AvailablePositive376269 - 37682919995.1

Displaying genes 351 – 360 of 3826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.