Thalassospira profundimaris strain R8-17

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodospirillales

Family

Thalassospiraceae

Genus

Thalassospira

Description

Thalassospira profundimaris strain R8-17 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. Its genomic information is available under the accession JPWB00000000.1. This organism is part of the Thalassospira genus, which is known for its marine habitat preferences. The Gram-negative classification indicates that T. profundimaris R8-17 possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of such bacteria. This structural feature can influence its interactions in marine environments, including its resistance to certain antibiotics and its ability to form biofilms. The single replicon suggests a streamlined genomic architecture, potentially allowing for efficient replication and regulation of essential cellular processes. Such a trait can be indicative of adaptation to specific ecological niches, where rapid responses to environmental changes are advantageous. In terms of ecological significance, the presence of T. profundimaris R8-17 in marine environments may contribute to nutrient cycling and the overall microbial diversity of these ecosystems. The bacterium's adaptations could play a role in the degradation of organic matter or in interactions with other marine organisms, thereby influencing community dynamics within its habitat. Understanding the traits of this strain can provide insights into the ecological roles of marine bacteria in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodospirillales
FamilyThalassospiraceae
GenusThalassospira
SpeciesThalassospira profundimaris
Strainstrain R8-17

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassospira profundimaris strain R8-17 contig36, whole genome

Gene Summary

Adenine Count

970459 bp

Thymine Count

990139 bp

Guanine Count

1201346 bp

Cytosine Count

1161871 bp

Genome Length

4323815 bp

Protein-coding Genes

3705 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinTH6_13220Not AvailablePositive2753366 - 275476949539.2
Hypothetical proteinTH6_13225Not AvailablePositive2754825 - 275593139282.4
dead/deah box helicaseTH6_00005Not AvailablePositive1 - 37714262.0
abc transporter substrate-binding proteinTH6_00010Not AvailablePositive657 - 149030983.6
16s ribosomal rnaNot AvailableNot AvailablePositive2094 - 3596Not Available
thioesteraseTH6_00015Not AvailablePositive2160 - 262416578.1
isovaleryl-coa dehydrogenaseTH6_00020Not AvailablePositive2683 - 385542442.9
acetyl-coa acetyltransferaseTH6_00025Not AvailablePositive3907 - 509441006.1
membrane proteinTH6_00030Not AvailablePositive5252 - 622633033.8
nitrogen regulatory protein p-iiTH6_00035Not AvailablePositive6231 - 654211279.8

Displaying genes 11 – 20 of 3763 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.