Chryseobacterium sp. JM1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Chryseobacterium

Description

Chryseobacterium sp. JM1 is characterized by its rod-shaped morphology and possesses a single replicon. This bacterium is part of the Chryseobacterium genus, which is known for its diverse ecological roles and potential biotechnological applications. The taxonomic classification of Chryseobacterium sp. JM1 can be traced through its accession number, JPRN00000000.1, which serves as a reference in genomic databases for further studies and comparisons with related species. Chryseobacterium species are often found in various environments, including soil and water, where they play a role in the decomposition of organic matter. Their rod shape may contribute to their adaptability in different ecological niches, allowing for efficient nutrient uptake and interaction with other microorganisms. Understanding the traits of Chryseobacterium sp. JM1 provides insight into its ecological significance. The presence of a single replicon suggests a streamlined genetic structure that may facilitate rapid adaptation to environmental changes. This adaptability is crucial for survival in diverse ecosystems, highlighting the importance of Chryseobacterium sp. JM1 in maintaining ecological balance and its potential utility in bioremediation or other applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium sp. JM1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium sp. JM1 Contig31, whole genome shotgun sequence.

Gene Summary

Adenine Count

1625269 bp

Thymine Count

1630993 bp

Guanine Count

1001221 bp

Cytosine Count

998673 bp

Genome Length

5256156 bp

Protein-coding Genes

4368 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferrochelataseIW22_02160Not AvailableNegative474704 - 47575640210.4
nitrogen fixation protein nifuIW22_02165Not AvailableNegative476002 - 47688032994.3
acetyltransferaseIW22_02170Not AvailablePositive477126 - 47765319049.9
hypothetical proteinIW22_02175Not AvailableNegative478061 - 47851016612.1
atpase aaaIW22_02180Not AvailablePositive478594 - 48072682536.2
hypothetical proteinIW22_02185Not AvailableNegative480790 - 48163831547.9
hypothetical proteinIW22_02190Not AvailablePositive482001 - 48300537386.7
3,4-dihydroxy-2-butanone 4-phosphate synthaseIW22_02195Not AvailablePositive483073 - 48419441644.9
catabolite gene activator proteinIW22_02200Not AvailablePositive484303 - 48488422820.6
methionyl-trna formyltransferaseIW22_02205Not AvailableNegative485041 - 48598535347.7

Displaying genes 401 – 410 of 4445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.