Escherichia coli strain 48

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 48 is a Gram-negative rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the average body temperature of many warm-blooded hosts, further indicating its adaptation to a host-associated habitat. E. coli strain 48 is classified as a facultative anaerobe, allowing it to grow in both aerobic and anaerobic environments, which enhances its ability to colonize various niches within the host. The Gram-negative nature of E. coli strain 48 suggests the presence of an outer membrane containing lipopolysaccharides, contributing to its structural integrity and potentially influencing interactions with the host's immune system. The rod shape and the cellular arrangement may provide advantages in terms of motility and nutrient acquisition, facilitating its survival in competitive microbial communities within the host. Given its facultative anaerobic metabolism and optimal growth temperature, E. coli strain 48 is well-suited for colonization in the gastrointestinal tract of warm-blooded animals, where it plays a role in nutrient processing. The strain's ability to thrive in a host-associated environment underscores its potential significance in microbial ecology, particularly in relation to the dynamic interactions between host and microbiota, which are essential for maintaining gut health and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 48

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 48
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 48


Gene Summary

Adenine Count

1564116 bp

Thymine Count

1568142 bp

Guanine Count

1598399 bp

Cytosine Count

1592491 bp

Genome Length

6323148 bp

Protein-coding Genes

5133 genes

Non-Coding Genes

757 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinJD73_08515Not AvailableNegative1763922 - 176485735085.7
Trna,type:arg,anti_codon:tct;Not AvailableNot AvailablePositive1764943 - 1765019Not Available
Trna,type:arg,anti_codon:tcg;Not AvailableNot AvailablePositive1765033 - 1765109Not Available
Trna,type:met,anti_codon:cat;Not AvailableNot AvailablePositive1765119 - 1765194Not Available
Putative dna methylaseJD73_08535Not AvailableNegative1765235 - 176629340398.1
AttlNot AvailableNot AvailablePositive1765332 - 1765345Not Available
Hypothetical proteinJD73_08540Not AvailableNegative1766444 - 176676412101.7
Bacteriophage antiterminator protein qJD73_08545Not AvailableNegative1766853 - 176754226788.2
Crossover junction endodeoxyribonuclease rusaJD73_08550Not AvailableNegative1767539 - 176789813467.5
Hypothetical proteinJD73_08555Not AvailableNegative1767911 - 176896039334.6

Displaying genes 1 – 10 of 5890 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Hemorrhagic colitisCausesPMC3035056
Early onset neonatal sepsisCausesPMC4560869
Renal failureCausesPMC4726323
AnemiaCausesPMC4726323
Hemorrhagic diarrheaCausesPMC4726323
HusCausesPMC5177732
Diarrheal diseaseCausesPMC5995498
Hemolytic uremic syndromeCausesPMC5995498
Acute bacterial meningitisCausesPMC6306750
EndometritisCausesPMC7238638

Displaying health effects 11 – 20 of 74 in total