Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 48 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1564116 bp
Thymine Count
1568142 bp
Guanine Count
1598399 bp
Cytosine Count
1592491 bp
Genome Length
6323148 bp
Protein-coding Genes
5133 genes
Non-Coding Genes
757 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase srmb | JD73_17220 | Not Available | Negative | 3647909 - 3649243 | 49901.0 |
| trna (adenine-n6)-methyltransferase | JD73_17225 | Not Available | Positive | 3649375 - 3650112 | 27269.4 |
| l-aspartate oxidase | JD73_17230 | Not Available | Negative | 3650097 - 3651719 | 60307.0 |
| rna polymerase sigma factor rpoe | JD73_17235 | Not Available | Positive | 3652127 - 3652702 | 21697.0 |
| anti-rna polymerase sigma factor sige | JD73_17240 | Not Available | Positive | 3652735 - 3653385 | 24322.8 |
| anti-sigma e factor | JD73_17245 | Not Available | Positive | 3653385 - 3654341 | 35751.8 |
| soxr reducing system protein rsec | JD73_17250 | Not Available | Positive | 3654338 - 3654817 | 16626.3 |
| elongation factor 4 | JD73_17255 | Not Available | Positive | 3655015 - 3656814 | 66588.1 |
| signal peptidase i | JD73_17260 | Not Available | Positive | 3656830 - 3657804 | 35948.3 |
| ribonuclease iii | JD73_17265 | Not Available | Positive | 3658077 - 3658757 | 25551.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





