Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutt | IQ62_43135 | Not Available | Negative | 9649320 - 9649787 | 17318.6 |
| atp-dependent dna ligase | IQ62_43140 | Not Available | Negative | 9649784 - 9651322 | 54873.9 |
| thioredoxin reductase | IQ62_43145 | Not Available | Negative | 9651451 - 9652380 | 32946.2 |
| xre family transcriptional regulator | IQ62_43150 | Not Available | Positive | 9652458 - 9653054 | 21805.1 |
| alcohol dehydrogenase | IQ62_43155 | Not Available | Positive | 9653168 - 9654145 | 33794.4 |
| acyl-coa dehydrogenase | IQ62_43160 | Not Available | Positive | 9654142 - 9655326 | 43661.0 |
| acyl-coa dehydrogenase | IQ62_43165 | Not Available | Positive | 9655323 - 9656399 | 37358.6 |
| hypothetical protein | IQ62_43170 | Not Available | Positive | 9656604 - 9657473 | 31932.9 |
| hypothetical protein | IQ62_43175 | Not Available | Positive | 9657591 - 9657785 | 6657.44 |
| hypothetical protein | IQ62_43180 | Not Available | Negative | 9657789 - 9658958 | 38665.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
