Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IQ62_39740 | Not Available | Positive | 8888303 - 8889292 | 35609.7 |
| dna-binding protein | IQ62_39745 | Not Available | Negative | 8889353 - 8889814 | 17187.7 |
| succinyl-coa:3-ketoacid-coa transferase | IQ62_39750 | Not Available | Positive | 8890063 - 8890845 | 27120.4 |
| succinyl-coa:3-ketoacid-coa transferase | IQ62_39755 | Not Available | Positive | 8890845 - 8891492 | 22480.2 |
| beta-ketoadipyl coa thiolase | IQ62_39760 | Not Available | Positive | 8891528 - 8892730 | 41206.2 |
| protocatechuate 3,4-dioxygenase | IQ62_39765 | Not Available | Positive | 8892849 - 8893622 | 29244.0 |
| protocatechuate 3,4-dioxygenase | IQ62_39770 | Not Available | Positive | 8893629 - 8894234 | 21671.4 |
| 3-carboxy-cis,cis-muconate cycloisomerase | IQ62_39775 | Not Available | Positive | 8894231 - 8895598 | 46914.8 |
| 4-carboxymuconolactone decarboxylase | IQ62_39780 | Not Available | Positive | 8895595 - 8896731 | 40406.9 |
| regulatory protein | IQ62_39785 | Not Available | Negative | 8896741 - 8899413 | 95583.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
