Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | IQ62_03285 | Not Available | Positive | 677144 - 677857 | 25292.7 |
| membrane protein | IQ62_03290 | Not Available | Positive | 677854 - 678747 | 30843.8 |
| thioredoxin reductase | IQ62_03295 | Not Available | Positive | 678921 - 679892 | 34307.6 |
| thioredoxin | IQ62_03300 | Not Available | Positive | 679934 - 680266 | 11940.2 |
| gcn5 family acetyltransferase | IQ62_03305 | Not Available | Negative | 680319 - 680936 | 22635.7 |
| plasmid partitioning protein parb | IQ62_03310 | Not Available | Negative | 681261 - 682358 | 39389.0 |
| chromosome partitioning protein | IQ62_03315 | Not Available | Negative | 682355 - 683278 | 32675.2 |
| 16s rrna methyltransferase | IQ62_03320 | Not Available | Negative | 683717 - 684433 | 25445.9 |
| single-stranded dna-binding protein | IQ62_03325 | Not Available | Negative | 684550 - 685062 | 18267.4 |
| protein translocase component yidc | IQ62_03330 | Not Available | Negative | 685078 - 686361 | 47183.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
