Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IQ62_28090 | Not Available | Negative | 6237440 - 6237934 | 17164.9 |
| extradiol dioxygenase | IQ62_28095 | Not Available | Negative | 6238104 - 6238496 | 14181.2 |
| 16s rrna methyltransferase | IQ62_28100 | Not Available | Negative | 6238541 - 6239281 | 25872.0 |
| 2-nitropropane dioxygenase | IQ62_28105 | Not Available | Negative | 6239278 - 6240384 | 38014.2 |
| molecular chaperone dnaj | IQ62_28110 | Not Available | Negative | 6240547 - 6241680 | 40345.6 |
| hrca family transcriptional regulator | IQ62_28115 | Not Available | Negative | 6241681 - 6242697 | 36638.2 |
| metallo-beta-lactamase | IQ62_28120 | Not Available | Positive | 6243035 - 6243775 | 25571.3 |
| hypothetical protein | IQ62_28125 | Not Available | Positive | 6243818 - 6244633 | 29587.3 |
| coproporphyrinogen iii oxidase | IQ62_28135 | Not Available | Negative | 6245106 - 6246338 | 44089.8 |
| protein phosphatase | IQ62_28140 | Not Available | Negative | 6246456 - 6248756 | 79665.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
