Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| betaine-aldehyde dehydrogenase | IQ62_25035 | Not Available | Positive | 5572738 - 5574198 | 52282.6 |
| catechol 1,2-dioxygenase | IQ62_25040 | Not Available | Positive | 5574191 - 5575135 | 35396.8 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | IQ62_25045 | Not Available | Positive | 5575154 - 5575999 | 30808.4 |
| amino acid permease | IQ62_25055 | Not Available | Positive | 5576910 - 5578367 | 50375.8 |
| aldehyde dehydrogenase | IQ62_25060 | Not Available | Positive | 5578425 - 5579918 | 53000.1 |
| peptidase c26 | IQ62_25065 | Not Available | Positive | 5579915 - 5580616 | 24985.3 |
| cobalamin biosynthesis protein cobn | IQ62_25070 | Not Available | Negative | 5580654 - 5584283 | 130472.0 |
| cobalamin biosynthesis protein cobg | IQ62_25075 | Not Available | Positive | 5584717 - 5586042 | 45365.0 |
| precorrin-8x methylmutase | IQ62_25080 | Not Available | Positive | 5586111 - 5586743 | 22016.5 |
| precorrin-3b c17-methyltransferase | IQ62_25085 | Not Available | Positive | 5586755 - 5588245 | 53261.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
