Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine dehydrogenase | IQ62_23305 | Not Available | Negative | 5139989 - 5142427 | 88660.3 |
| glycine/betaine abc transporter substrate-binding protein | IQ62_23310 | Not Available | Negative | 5142678 - 5143655 | 35624.9 |
| abc transporter permease | IQ62_23315 | Not Available | Negative | 5143668 - 5145698 | 71366.9 |
| glycine/betaine abc transporter atp-binding protein | IQ62_23320 | Not Available | Negative | 5145698 - 5146786 | 40145.4 |
| betaine-aldehyde dehydrogenase | IQ62_23325 | Not Available | Negative | 5146807 - 5148276 | 52735.1 |
| formyltetrahydrofolate deformylase | IQ62_23330 | Not Available | Positive | 5148495 - 5149367 | 32586.8 |
| 5,10-methylenetetrahydrofolate reductase | IQ62_23335 | Not Available | Negative | 5149471 - 5150307 | 29989.2 |
| choline dehydrogenase | IQ62_23340 | Not Available | Negative | 5150311 - 5151990 | 61713.3 |
| iclr family transcriptional regulator | IQ62_23345 | Not Available | Positive | 5152140 - 5152937 | 28519.1 |
| 2fe-2s ferredoxin | IQ62_23350 | Not Available | Negative | 5152947 - 5154077 | 42360.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
