Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | IQ62_20330 | Not Available | Positive | 4467131 - 4468405 | 44302.7 |
| zinc metalloprotease | IQ62_20335 | Not Available | Positive | 4468402 - 4469706 | 47192.7 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | IQ62_20340 | Not Available | Positive | 4469967 - 4471124 | 40572.0 |
| gcn5 family acetyltransferase | IQ62_20345 | Not Available | Positive | 4471308 - 4472162 | 30668.9 |
| acetyltransferase | IQ62_20350 | Not Available | Positive | 4472416 - 4472946 | 19330.3 |
| prolyl-trna synthetase | IQ62_20355 | Not Available | Positive | 4473081 - 4474784 | 60991.0 |
| hypothetical protein | IQ62_20360 | Not Available | Positive | 4474895 - 4475305 | 12660.3 |
| thiamine biosynthesis protein | IQ62_20365 | Not Available | Positive | 4475305 - 4476276 | 33793.0 |
| ferric reductase | IQ62_20370 | Not Available | Positive | 4476273 - 4476854 | 20748.7 |
| nadh dehydrogenase | IQ62_20375 | Not Available | Positive | 4476902 - 4478092 | 41296.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
