Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n5-carboxyaminoimidazole ribonucleotide mutase | IQ62_11970 | Not Available | Positive | 2589496 - 2590020 | 18187.1 |
| membrane dipeptidase | IQ62_11975 | Not Available | Positive | 2590067 - 2591254 | 42448.0 |
| peptidase m19 | IQ62_11980 | Not Available | Positive | 2591412 - 2592725 | 45258.1 |
| glyoxalase | IQ62_11985 | Not Available | Negative | 2592833 - 2593195 | 12801.1 |
| hypothetical protein | IQ62_11990 | Not Available | Positive | 2593299 - 2593805 | 17817.3 |
| udp-glucose 6-dehydrogenase | IQ62_11995 | Not Available | Negative | 2593939 - 2595282 | 48013.4 |
| acyl-coa dehydrogenase | IQ62_12000 | Not Available | Positive | 2595490 - 2596647 | 41537.5 |
| ferredoxin | IQ62_12005 | Not Available | Positive | 2596823 - 2597188 | 13303.6 |
| transcriptional regulator | IQ62_12010 | Not Available | Negative | 2597258 - 2598454 | 42324.5 |
| lytr family transcriptional regulator | IQ62_12015 | Not Available | Negative | 2598677 - 2600038 | 49327.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
