Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IQ62_11870 | Not Available | Negative | 2565825 - 2566199 | 13156.0 |
| hypothetical protein | IQ62_11875 | Not Available | Negative | 2566216 - 2566818 | 20602.4 |
| hypothetical protein | IQ62_11880 | Not Available | Negative | 2566856 - 2567824 | 33758.3 |
| hypothetical protein | IQ62_11885 | Not Available | Negative | 2567821 - 2568219 | 14025.6 |
| diaminopimelate decarboxylase | IQ62_11890 | Not Available | Negative | 2568602 - 2570035 | 50062.6 |
| urocanate hydratase | IQ62_11895 | Not Available | Positive | 2570192 - 2571856 | 59750.1 |
| allantoate amidohydrolase | IQ62_11900 | Not Available | Positive | 2571853 - 2573199 | 47200.0 |
| n-formimino-l-glutamate deiminase | IQ62_11905 | Not Available | Positive | 2573196 - 2574551 | 47553.0 |
| imidazolonepropionase | IQ62_11910 | Not Available | Positive | 2574548 - 2575840 | 44968.6 |
| hypothetical protein | IQ62_11915 | Not Available | Negative | 2575916 - 2578033 | 71571.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
