Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe hydrogenase formation protein | IQ62_11220 | Not Available | Positive | 2430410 - 2430715 | 11226.3 |
| hydrogenase formation protein hupd | IQ62_11225 | Not Available | Positive | 2430712 - 2431842 | 41342.9 |
| hydrogenase | IQ62_11230 | Not Available | Positive | 2431835 - 2432917 | 36436.1 |
| hypothetical protein | IQ62_11235 | Not Available | Negative | 2432977 - 2433375 | 14171.7 |
| rna polymerase sigma24 factor | IQ62_11240 | Not Available | Negative | 2433589 - 2434734 | 41112.9 |
| hypothetical protein | IQ62_11245 | Not Available | Negative | 2434743 - 2435150 | 14818.5 |
| histidine kinase | IQ62_11250 | Not Available | Positive | 2435958 - 2439950 | 142238.0 |
| antitermination regulator | IQ62_11255 | Not Available | Positive | 2440027 - 2442552 | 89267.9 |
| atp-binding protein | IQ62_11260 | Not Available | Positive | 2442651 - 2443061 | 14666.3 |
| rna polymerase sigma factor | IQ62_11265 | Not Available | Negative | 2443212 - 2444063 | 31868.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
