Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | IQ62_09135 | Not Available | Positive | 1983397 - 1984650 | 44182.5 |
| abc transporter permease | IQ62_09140 | Not Available | Positive | 1984849 - 1985733 | 31010.0 |
| urea abc transporter permease | IQ62_09145 | Not Available | Positive | 1985730 - 1986884 | 39977.3 |
| urea abc transporter atp-binding protein | IQ62_09150 | Not Available | Positive | 1986881 - 1987696 | 29166.0 |
| urea abc transporter atp-binding protein | IQ62_09155 | Not Available | Positive | 1987702 - 1988394 | 24308.4 |
| major facilitator transporter | IQ62_09160 | Not Available | Negative | 1988589 - 1989947 | 46275.1 |
| arsr family transcriptional regulator | IQ62_09165 | Not Available | Positive | 1990167 - 1990526 | 12878.3 |
| 1,4-beta-xylanase | IQ62_09170 | Not Available | Negative | 1990777 - 1992882 | 77827.4 |
| iron-sulfur protein | IQ62_09175 | Not Available | Negative | 1993101 - 1993988 | 32020.0 |
| siderophore biosynthesis protein | IQ62_09180 | Not Available | Positive | 1994325 - 1995501 | 43017.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
