Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Kitasatosporales
Family
Streptomycetaceae
Genus
Streptomyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Kitasatosporales |
| Family | Streptomycetaceae |
| Genus | Streptomyces |
| Species | Streptomyces scabiei |
| Strain | strain NCPPB 4086 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Tailed |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Sporulating |
| Energy source | Not Available |
| Pathogenicity | Plant |
Gene Summary
Adenine Count
1527745 bp
Thymine Count
1541430 bp
Guanine Count
3712549 bp
Cytosine Count
3680302 bp
Genome Length
10462026 bp
Protein-coding Genes
8097 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IQ62_07420 | Not Available | Positive | 1575418 - 1575639 | 7308.03 |
| xre family transcriptional regulator | IQ62_07425 | Not Available | Positive | 1575884 - 1576741 | 31691.6 |
| hypothetical protein | IQ62_07430 | Not Available | Positive | 1576785 - 1577291 | 16799.0 |
| cobalamin biosynthesis protein cobd | IQ62_07435 | Not Available | Positive | 1578254 - 1579225 | 32997.5 |
| cobalamin biosynthesis protein cobq | IQ62_07440 | Not Available | Positive | 1579222 - 1580748 | 53791.6 |
| magnesium chelatase | IQ62_07450 | Not Available | Positive | 1580825 - 1582873 | 71712.0 |
| cobinamide adenolsyltransferase | IQ62_07455 | Not Available | Positive | 1582874 - 1583473 | 22339.4 |
| cobyrinic acid ac-diamide synthase | IQ62_07460 | Not Available | Positive | 1583502 - 1584851 | 46794.1 |
| permease | IQ62_07465 | Not Available | Negative | 1584896 - 1585624 | 24793.5 |
| cobalamin biosynthesis protein cbix | IQ62_07475 | Not Available | Positive | 1586399 - 1587340 | 33572.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Scab lesions | Causes | PMC11609053 |
| Potato common scab | Causes | PMC11818755 |
| Common scab | Causes | PMC11818755 |
| Potato common scab (cs) | Causes | PMC11818755 |
| Common scab | Causes | PMC12542781 |
| Common scab disease | Causes | PMC12648119 |
| Cs | Causes | PMC12648119 |
| Common scab | Causes | PMC12879927 |
| Common and acid scab | Causes | PMC12879927 |
| Potato scab | Causes | PMC4664631 |
